RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 TNPO1Q92973 898 aaKnown RBP10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.4□□□□□ -0.742e-11■□□□□ 10.8
CALCOCO2-201ENST00000258947 SMC3Q9UQE7 1217 aa10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 MCM4P33991 863 aa10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 TRAPPC3LQ5T215 181 aa10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 CREB3L3Q68CJ9 461 aa10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 MCTP1Q6DN14 999 aa10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 ANKRD18AQ8IVF6 992 aa10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 STK11IPQ8N1F8 1099 aa10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 HAUS7Q99871 368 aa10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 CRYBG1Q9Y4K1 1723 aa10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 CIAO1O76071 339 aa10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 ZAP70P43403 619 aa10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 HAND2P61296 217 aa10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 FAM196AQ6ZSG2 479 aa10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 NLRP3Q96P20 1036 aa10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 DDX11L8A8MPP1 907 aa10.39□□□□□ -0.75
CALCOCO2-201ENST00000258947 CAMTA2O94983 1202 aa10.39□□□□□ -0.75
CALCOCO2-201ENST00000258947 ERFEQ4G0M1 354 aa10.39□□□□□ -0.75
CALCOCO2-201ENST00000258947 CCDC83Q8IWF9 413 aa10.39□□□□□ -0.75
CALCOCO2-201ENST00000258947 LRP2BPQ9P2M1 347 aa10.39□□□□□ -0.75
CALCOCO2-201ENST00000258947 AK2P54819 239 aa10.39□□□□□ -0.75
CALCOCO2-201ENST00000258947 GSE1Q14687 1217 aa10.39□□□□□ -0.75
CALCOCO2-201ENST00000258947 SLC9C2Q5TAH2 1124 aa10.39□□□□□ -0.75
CALCOCO2-201ENST00000258947 TPTE2Q6XPS3 522 aa10.39□□□□□ -0.75
CALCOCO2-201ENST00000258947 ZNF34Q8IZ26 560 aa10.39□□□□□ -0.75
CALCOCO2-201ENST00000258947 LRRC2Q9BYS8 371 aa10.39□□□□□ -0.75
CALCOCO2-201ENST00000258947 CIZ1Q9ULV3 898 aaPredicted RBP10.39□□□□□ -0.75
CALCOCO2-201ENST00000258947 USP42Q9H9J4 1324 aaKnown RBP10.39□□□□□ -0.75
CALCOCO2-201ENST00000258947 ABCA3Q99758 1704 aa10.39□□□□□ -0.75
CALCOCO2-201ENST00000258947 VPS37CA5D8V6 355 aaPredicted RBP10.38□□□□□ -0.75
CALCOCO2-201ENST00000258947 PDE8BO95263 885 aa10.38□□□□□ -0.75
CALCOCO2-201ENST00000258947 PUM3Q15397 648 aaKnown RBP10.38□□□□□ -0.75
CALCOCO2-201ENST00000258947 ADCK5Q3MIX3 580 aa10.38□□□□□ -0.75
CALCOCO2-201ENST00000258947 CDHR2Q9BYE9 1310 aa10.38□□□□□ -0.75
CALCOCO2-201ENST00000258947 RNF113AO15541 343 aaKnown RBP10.38□□□□□ -0.75
CALCOCO2-201ENST00000258947 FOSBP53539 338 aa10.38□□□□□ -0.75
CALCOCO2-201ENST00000258947 CWC22Q9HCG8 908 aaKnown RBP10.38□□□□□ -0.75
CALCOCO2-201ENST00000258947 LIMCH1Q9UPQ0 1083 aa10.38□□□□□ -0.75
CALCOCO2-201ENST00000258947 DDX49Q9Y6V7 483 aaKnown RBP10.38□□□□□ -0.75
CALCOCO2-201ENST00000258947 SIPA1L3O60292 1781 aaPredicted RBP10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 SLC27A2O14975 620 aa10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 PHKA1P46020 1223 aa10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 CHAF1AQ13111 956 aaPredicted RBP10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 TBC1D9BQ66K14 1250 aa10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 KRT27Q7Z3Y8 459 aa10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 NECAB1Q8N987 351 aa10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 GPR108Q9NPR9 543 aa10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 RAI14Q9P0K7 980 aa10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 U3KPZ7 1027 aaPredicted RBP10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 SLIT2O94813 1529 aa10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 COL16A1Q07092 1604 aaPredicted RBP10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 TRAK2O60296 914 aa10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 CSF1RP07333 972 aa10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 RALYLQ86SE5 291 aaKnown RBP10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 AIDAQ96BJ3 306 aa10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 ZSCAN25Q6NSZ9 544 aa10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 LPIN2Q92539 896 aa10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 NYXQ9GZU5 481 aa10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 GNL3LQ9NVN8 582 aaKnown RBP10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 ANKIB1Q9P2G1 1089 aa10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.37□□□□□ -0.75
CALCOCO2-201ENST00000258947 BCL9LQ86UU0 1499 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 PPFIA3O75145 1194 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 TRDNQ13061 729 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 SCARF1Q14162 830 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 CCDC102BQ68D86 513 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 PLA2G12BQ9BX93 195 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 TFCP2L1Q9NZI6 479 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 JAG2Q9Y219 1238 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 RPS6KA4O75676 772 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 PKP1Q13835 747 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 KRT32Q14532 448 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 CAVIN4Q5BKX8 364 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 ARHGEF1Q92888 912 aaKnown RBP10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 FBXO3Q9UK99 471 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 AFDNP55196 1824 aaKnown RBP10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 UQCRFS1P1P0C7P4 283 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 MAP3K12Q12852 859 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 CHST3Q7LGC8 479 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 NEK1Q96PY6 1258 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 RIPOR2Q9Y4F9 1068 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 MROH5Q6ZUA9 1318 aa10.36□□□□□ -0.75
CALCOCO2-201ENST00000258947 BCAMP50895 628 aa10.35□□□□□ -0.75
CALCOCO2-201ENST00000258947 CHRNDQ07001 517 aa10.35□□□□□ -0.75
CALCOCO2-201ENST00000258947 VPS53Q5VIR6 699 aa10.35□□□□□ -0.75
CALCOCO2-201ENST00000258947 MAP4K1Q92918 833 aa10.35□□□□□ -0.75
CALCOCO2-201ENST00000258947 ADAMTS7Q9UKP4 1686 aa10.35□□□□□ -0.75
CALCOCO2-201ENST00000258947 TTF1Q15361 905 aaPredicted RBP10.35□□□□□ -0.75
CALCOCO2-201ENST00000258947 CLEC4GQ6UXB4 293 aa10.35□□□□□ -0.75
CALCOCO2-201ENST00000258947 CNBD1Q8NA66 436 aa10.35□□□□□ -0.75
CALCOCO2-201ENST00000258947 PRPF40AO75400 957 aaKnown RBP10.35□□□□□ -0.75
CALCOCO2-201ENST00000258947 IMMTQ16891 758 aaKnown RBP10.35□□□□□ -0.75
CALCOCO2-201ENST00000258947 RRP12Q5JTH9 1297 aaKnown RBP10.35□□□□□ -0.75
CALCOCO2-201ENST00000258947 RUFY3Q7L099 469 aa10.35□□□□□ -0.75
CALCOCO2-201ENST00000258947 FAM184AQ8NB25 1140 aa10.35□□□□□ -0.75
CALCOCO2-201ENST00000258947 RPGRQ92834 1020 aaKnown RBP10.35□□□□□ -0.75
CALCOCO2-201ENST00000258947 BCL11BQ9C0K0 894 aaPredicted RBP10.35□□□□□ -0.75
CALCOCO2-201ENST00000258947 HMG20BQ9P0W2 317 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms