RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 CIAO1O76071 339 aa28.35■■■□□ 2.13
APOE-201ENST00000252486 MPNDQ8N594 471 aa28.35■■■□□ 2.13
APOE-201ENST00000252486 EYA2O00167 538 aa28.34■■■□□ 2.13
APOE-201ENST00000252486 DPP8Q6V1X1 898 aaPredicted RBP28.34■■■□□ 2.13
APOE-201ENST00000252486 ARHGAP27Q6ZUM4 889 aa28.34■■■□□ 2.13
APOE-201ENST00000252486 PODXL2Q9NZ53 605 aa28.34■■■□□ 2.13
APOE-201ENST00000252486 LTBP3Q9NS15 1303 aa28.34■■■□□ 2.13
APOE-201ENST00000252486 SUPT20HQ8NEM7 779 aa28.33■■■□□ 2.13
APOE-201ENST00000252486 KLHDC4Q8TBB5 520 aa28.33■■■□□ 2.13
APOE-201ENST00000252486 PSMD1Q99460 953 aa28.33■■■□□ 2.13
APOE-201ENST00000252486 RIPOR2Q9Y4F9 1068 aa28.33■■■□□ 2.13
APOE-201ENST00000252486 XDHP47989 1333 aa28.33■■■□□ 2.13
APOE-201ENST00000252486 MROH5Q6ZUA9 1318 aa28.33■■■□□ 2.13
APOE-201ENST00000252486 SNED1Q8TER0 1413 aa28.33■■■□□ 2.13
APOE-201ENST00000252486 FER1L6Q2WGJ9 1857 aa28.32■■■□□ 2.12
APOE-201ENST00000252486 NEFLP07196 543 aa28.32■■■□□ 2.12
APOE-201ENST00000252486 IRX6P78412 446 aaPredicted RBP28.32■■■□□ 2.12
APOE-201ENST00000252486 FKBP4Q02790 459 aaKnown RBP eCLIP28.32■■■□□ 2.12
APOE-201ENST00000252486 OLFM4Q6UX06 510 aa28.32■■■□□ 2.12
APOE-201ENST00000252486 ANKIB1Q9P2G1 1089 aa28.32■■■□□ 2.12
APOE-201ENST00000252486 NSFL1CQ9UNZ2 370 aaKnown RBP28.32■■■□□ 2.12
APOE-201ENST00000252486 IL15P40933 162 aaPredicted RBP28.31■■■□□ 2.12
APOE-201ENST00000252486 CHRNDQ07001 517 aa28.31■■■□□ 2.12
APOE-201ENST00000252486 PUS3Q9BZE2 481 aaKnown RBP28.31■■■□□ 2.12
APOE-201ENST00000252486 TAOK3Q9H2K8 898 aa28.31■■■□□ 2.12
APOE-201ENST00000252486 PA2G4Q9UQ80 394 aaKnown RBP28.31■■■□□ 2.12
APOE-201ENST00000252486 GPSM2P81274 684 aa28.3■■■□□ 2.12
APOE-201ENST00000252486 RTFDC1Q9BY42 306 aaPredicted RBP28.3■■■□□ 2.12
APOE-201ENST00000252486 NFKBIEO00221 500 aa28.29■■■□□ 2.12
APOE-201ENST00000252486 ATP2B4P23634 1241 aa28.29■■■□□ 2.12
APOE-201ENST00000252486 G3BP1Q13283 466 aaKnown RBP eCLIP28.29■■■□□ 2.126e-37■□□□□ 10
APOE-201ENST00000252486 LRRC24Q50LG9 513 aa28.29■■■□□ 2.12
APOE-201ENST00000252486 METTL24Q5JXM2 366 aa28.29■■■□□ 2.12
APOE-201ENST00000252486 SIRT2Q8IXJ6 389 aa28.29■■■□□ 2.12
APOE-201ENST00000252486 SIL1Q9H173 461 aa28.29■■■□□ 2.12
APOE-201ENST00000252486 GGA1Q9UJY5 639 aa28.29■■■□□ 2.12
APOE-201ENST00000252486 LEMD3Q9Y2U8 911 aa28.29■■■□□ 2.12
APOE-201ENST00000252486 NOP58Q9Y2X3 529 aaKnown RBP28.29■■■□□ 2.12
APOE-201ENST00000252486 HSP90AB4PQ58FF6 505 aa28.28■■■□□ 2.12
APOE-201ENST00000252486 VPS33BQ9H267 617 aa28.28■■■□□ 2.12
APOE-201ENST00000252486 PCDHB15Q9Y5E8 787 aa28.28■■■□□ 2.12
APOE-201ENST00000252486 LTBP1Q14766 1721 aa28.27■■■□□ 2.12
APOE-201ENST00000252486 SURF6O75683 361 aaKnown RBP28.27■■■□□ 2.12
APOE-201ENST00000252486 ATG9AQ7Z3C6 839 aa28.27■■■□□ 2.12
APOE-201ENST00000252486 EYA3Q99504 573 aa28.27■■■□□ 2.12
APOE-201ENST00000252486 SLC51AQ86UW1 340 aa28.26■■■□□ 2.11
APOE-201ENST00000252486 CEP126Q9P2H0 1117 aa28.26■■■□□ 2.11
APOE-201ENST00000252486 C6orf229H3BNL8 230 aa28.25■■■□□ 2.11
APOE-201ENST00000252486 UFL1O94874 794 aa28.25■■■□□ 2.11
APOE-201ENST00000252486 KCNJ4P48050 445 aa28.25■■■□□ 2.11
APOE-201ENST00000252486 TBC1D16Q8TBP0 767 aa28.25■■■□□ 2.11
APOE-201ENST00000252486 A0A1B0GUL6 1792 aa28.24■■■□□ 2.11
APOE-201ENST00000252486 PDE8BO95263 885 aa28.24■■■□□ 2.11
APOE-201ENST00000252486 OS9Q13438 667 aaPredicted RBP28.24■■■□□ 2.11
APOE-201ENST00000252486 ERC1Q8IUD2 1116 aa28.24■■■□□ 2.11
APOE-201ENST00000252486 DUOX1Q9NRD9 1551 aa28.24■■■□□ 2.11
APOE-201ENST00000252486 ZNF804BA4D1E1 1349 aa28.23■■■□□ 2.11
APOE-201ENST00000252486 LMNB1P20700 586 aa28.23■■■□□ 2.11
APOE-201ENST00000252486 UBE4AQ14139 1066 aa28.23■■■□□ 2.11
APOE-201ENST00000252486 HELBQ8NG08 1087 aaPredicted RBP28.23■■■□□ 2.11
APOE-201ENST00000252486 POLLQ9UGP5 575 aa28.23■■■□□ 2.11
APOE-201ENST00000252486 RASSF7Q02833 373 aa28.22■■■□□ 2.11
APOE-201ENST00000252486 HDAC1Q13547 482 aaPredicted RBP28.22■■■□□ 2.11
APOE-201ENST00000252486 VGLL2Q8N8G2 317 aa28.22■■■□□ 2.11
APOE-201ENST00000252486 RAB11FIP3O75154 756 aa28.21■■■□□ 2.11
APOE-201ENST00000252486 TAF5LO75529 589 aa28.21■■■□□ 2.11
APOE-201ENST00000252486 IARSP41252 1262 aaKnown RBP28.21■■■□□ 2.11
APOE-201ENST00000252486 ZC3H12CQ9C0D7 883 aaKnown RBP28.21■■■□□ 2.11
APOE-201ENST00000252486 ZNF277Q9NRM2 450 aaPredicted RBP28.21■■■□□ 2.11
APOE-201ENST00000252486 PUM3Q15397 648 aaKnown RBP28.2■■■□□ 2.1
APOE-201ENST00000252486 WASHC4Q2M389 1173 aa28.2■■■□□ 2.1
APOE-201ENST00000252486 RWDD1Q9H446 243 aaPredicted RBP28.2■■■□□ 2.1
APOE-201ENST00000252486 AKAP2Q9Y2D5 859 aa28.2■■■□□ 2.1
APOE-201ENST00000252486 KIAA2012Q0VF49 1180 aa28.19■■■□□ 2.1
APOE-201ENST00000252486 C15orf52Q6ZUT6 534 aaKnown RBP28.19■■■□□ 2.1
APOE-201ENST00000252486 EXOC6BQ9Y2D4 811 aa28.19■■■□□ 2.1
APOE-201ENST00000252486 MED23Q9ULK4 1368 aa28.19■■■□□ 2.1
APOE-201ENST00000252486 PPIP5K2O43314 1243 aa28.18■■■□□ 2.1
APOE-201ENST00000252486 DCTPP1Q9H773 170 aa28.18■■■□□ 2.1
APOE-201ENST00000252486 SBF1O95248 1867 aa28.17■■■□□ 2.1
APOE-201ENST00000252486 TFCP2Q12800 502 aa28.17■■■□□ 2.1
APOE-201ENST00000252486 LARGE2Q8N3Y3 721 aa28.17■■■□□ 2.1
APOE-201ENST00000252486 GPR108Q9NPR9 543 aa28.17■■■□□ 2.1
APOE-201ENST00000252486 SASH1O94885 1247 aa28.16■■■□□ 2.1
APOE-201ENST00000252486 IFIT1P09914 478 aaKnown RBP28.16■■■□□ 2.1
APOE-201ENST00000252486 SLC5A1P13866 664 aa28.16■■■□□ 2.1
APOE-201ENST00000252486 ATP2B3Q16720 1220 aa28.16■■■□□ 2.1
APOE-201ENST00000252486 LPIN2Q92539 896 aa28.16■■■□□ 2.1
APOE-201ENST00000252486 KIF1BPQ96EK5 621 aa28.16■■■□□ 2.1
APOE-201ENST00000252486 FGFR2P21802 821 aa28.15■■■□□ 2.1
APOE-201ENST00000252486 AOC3Q16853 763 aa28.15■■■□□ 2.1
APOE-201ENST00000252486 ERICH6BQ5W0A0 696 aa28.15■■■□□ 2.1
APOE-201ENST00000252486 JDP2Q8WYK2 163 aa28.15■■■□□ 2.1
APOE-201ENST00000252486 RNF181Q9P0P0 153 aa28.15■■■□□ 2.1
APOE-201ENST00000252486 C9orf131Q5VYM1 1079 aa28.14■■■□□ 2.1
APOE-201ENST00000252486 CCDC88AQ3V6T2 1871 aa28.14■■■□□ 2.1
APOE-201ENST00000252486 DICER1Q9UPY3 1922 aaKnown RBP28.14■■■□□ 2.09
APOE-201ENST00000252486 G3V3G9 751 aa28.13■■■□□ 2.09
APOE-201ENST00000252486 RIMBP2O15034 1052 aa28.13■■■□□ 2.09
APOE-201ENST00000252486 PRELPP51888 382 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms