RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 ZSCAN22P10073 491 aaPredicted RBP18.04■□□□□ 0.48
DDX49-201ENST00000247003 DZIP3Q86Y13 1208 aaKnown RBP18.04■□□□□ 0.48
DDX49-201ENST00000247003 ALDH8A1Q9H2A2 487 aaPredicted RBP18.04■□□□□ 0.48
DDX49-201ENST00000247003 GJB2P29033 226 aa18.03■□□□□ 0.48
DDX49-201ENST00000247003 HLFQ16534 295 aa18.03■□□□□ 0.48
DDX49-201ENST00000247003 CCDC85AQ96PX6 553 aaPredicted RBP18.03■□□□□ 0.48
DDX49-201ENST00000247003 NUP98P52948 1817 aa18.03■□□□□ 0.48
DDX49-201ENST00000247003 NWD2Q9ULI1 1742 aa18.03■□□□□ 0.48
DDX49-201ENST00000247003 ANKRD18BA2A2Z9 1011 aa18.02■□□□□ 0.48
DDX49-201ENST00000247003 CTSWP56202 376 aa18.02■□□□□ 0.48
DDX49-201ENST00000247003 ZNF445P59923 1031 aa18.02■□□□□ 0.48
DDX49-201ENST00000247003 ZSCAN23Q3MJ62 389 aa18.02■□□□□ 0.48
DDX49-201ENST00000247003 SYAP1Q96A49 352 aaPredicted RBP18.02■□□□□ 0.48
DDX49-201ENST00000247003 SLC4A9Q96Q91 983 aa18.02■□□□□ 0.48
DDX49-201ENST00000247003 TRMT112Q9UI30 125 aaKnown RBP18.02■□□□□ 0.48
DDX49-201ENST00000247003 SYT1P21579 422 aa18.02■□□□□ 0.47
DDX49-201ENST00000247003 ME3Q16798 604 aa18.02■□□□□ 0.47
DDX49-201ENST00000247003 CCDC129Q6ZRS4 1044 aa18.02■□□□□ 0.47
DDX49-201ENST00000247003 GPT2Q8TD30 523 aa18.02■□□□□ 0.47
DDX49-201ENST00000247003 ANP32BQ92688 251 aaKnown RBP18.02■□□□□ 0.47
DDX49-201ENST00000247003 NEK1Q96PY6 1258 aa18.02■□□□□ 0.47
DDX49-201ENST00000247003 ABCC12Q96J65 1359 aa18.02■□□□□ 0.47
DDX49-201ENST00000247003 IRS4O14654 1257 aaPredicted RBP18.01■□□□□ 0.47
DDX49-201ENST00000247003 ITGA6P23229 1130 aa18.01■□□□□ 0.47
DDX49-201ENST00000247003 METTL24Q5JXM2 366 aa18.01■□□□□ 0.47
DDX49-201ENST00000247003 SEC62Q99442 399 aaKnown RBP18.01■□□□□ 0.47
DDX49-201ENST00000247003 DSCC1Q9BVC3 393 aa18.01■□□□□ 0.47
DDX49-201ENST00000247003 RNF113AO15541 343 aaKnown RBP18■□□□□ 0.47
DDX49-201ENST00000247003 HMGB1P09429 215 aaKnown RBP18■□□□□ 0.47
DDX49-201ENST00000247003 CSPP1Q1MSJ5 1256 aa18■□□□□ 0.47
DDX49-201ENST00000247003 ZMYM1Q5SVZ6 1142 aa18■□□□□ 0.47
DDX49-201ENST00000247003 GAS2L3Q86XJ1 694 aa18■□□□□ 0.47
DDX49-201ENST00000247003 XAGE2Q96GT9 111 aa18■□□□□ 0.47
DDX49-201ENST00000247003 PANK2Q9BZ23 570 aa18■□□□□ 0.47
DDX49-201ENST00000247003 CNNM1Q9NRU3 951 aa18■□□□□ 0.47
DDX49-201ENST00000247003 TPCN1Q9ULQ1 816 aa18■□□□□ 0.47
DDX49-201ENST00000247003 PDE8AO60658 829 aa18■□□□□ 0.47
DDX49-201ENST00000247003 F13A1P00488 732 aa18■□□□□ 0.47
DDX49-201ENST00000247003 PDCP20941 246 aa18■□□□□ 0.47
DDX49-201ENST00000247003 FKBP4Q02790 459 aaKnown RBP eCLIP18■□□□□ 0.47
DDX49-201ENST00000247003 LDHAL6AQ6ZMR3 332 aa18■□□□□ 0.47
DDX49-201ENST00000247003 RIC1Q4ADV7 1423 aa17.99■□□□□ 0.47
DDX49-201ENST00000247003 ZFYP08048 801 aaPredicted RBP17.99■□□□□ 0.47
DDX49-201ENST00000247003 ATP2B3Q16720 1220 aa17.99■□□□□ 0.47
DDX49-201ENST00000247003 FOXD4L6Q3SYB3 417 aaPredicted RBP17.99■□□□□ 0.47
DDX49-201ENST00000247003 FOXD4L3Q6VB84 417 aaPredicted RBP17.99■□□□□ 0.47
DDX49-201ENST00000247003 TTLL11Q8NHH1 800 aa17.99■□□□□ 0.47
DDX49-201ENST00000247003 CHAMP1Q96JM3 812 aa17.99■□□□□ 0.47
DDX49-201ENST00000247003 NUTM2BA6NNL0 878 aaPredicted RBP17.98■□□□□ 0.47
DDX49-201ENST00000247003 NUTM2EB1AL46 878 aaPredicted RBP17.98■□□□□ 0.47
DDX49-201ENST00000247003 FGD1P98174 961 aa17.98■□□□□ 0.47
DDX49-201ENST00000247003 NUTM2AQ8IVF1 878 aaPredicted RBP17.98■□□□□ 0.47
DDX49-201ENST00000247003 NECAB1Q8N987 351 aa17.98■□□□□ 0.47
DDX49-201ENST00000247003 GREM2Q9H772 168 aa17.98■□□□□ 0.47
DDX49-201ENST00000247003 CCDC87Q9NVE4 849 aa17.98■□□□□ 0.47
DDX49-201ENST00000247003 TBC1D2BQ9UPU7 963 aa17.98■□□□□ 0.47
DDX49-201ENST00000247003 CICQ96RK0 1608 aaPredicted RBP17.98■□□□□ 0.47
DDX49-201ENST00000247003 SPATA31A5Q5VU36 1347 aa17.98■□□□□ 0.47
DDX49-201ENST00000247003 SPATA31A7Q8IWB4 1347 aa17.98■□□□□ 0.47
DDX49-201ENST00000247003 CYP21A2P08686 494 aa17.98■□□□□ 0.47
DDX49-201ENST00000247003 HSP90B1P14625 803 aaKnown RBP17.98■□□□□ 0.47
DDX49-201ENST00000247003 ATP6V1AP38606 617 aa17.98■□□□□ 0.47
DDX49-201ENST00000247003 AK7Q96M32 723 aa17.98■□□□□ 0.47
DDX49-201ENST00000247003 MAST3O60307 1309 aa17.97■□□□□ 0.47
DDX49-201ENST00000247003 VPS37CA5D8V6 355 aaPredicted RBP17.97■□□□□ 0.47
DDX49-201ENST00000247003 PHF14O94880 888 aa17.97■□□□□ 0.47
DDX49-201ENST00000247003 NASPP49321 788 aaPredicted RBP17.97■□□□□ 0.47
DDX49-201ENST00000247003 TOB2Q14106 344 aaPredicted RBP17.97■□□□□ 0.47
DDX49-201ENST00000247003 TMEM87AQ8NBN3 555 aa17.97■□□□□ 0.47
DDX49-201ENST00000247003 ACSBG1Q96GR2 724 aa17.97■□□□□ 0.47
DDX49-201ENST00000247003 TCEANC2Q96MN5 208 aa17.97■□□□□ 0.47
DDX49-201ENST00000247003 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
DDX49-201ENST00000247003 TAF6LQ9Y6J9 622 aa17.97■□□□□ 0.47
DDX49-201ENST00000247003 CHGBP05060 677 aa17.96■□□□□ 0.47
DDX49-201ENST00000247003 ADORA1P30542 326 aa17.96■□□□□ 0.47
DDX49-201ENST00000247003 FAM43AQ8N2R8 423 aa17.96■□□□□ 0.47
DDX49-201ENST00000247003 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.96■□□□□ 0.47
DDX49-201ENST00000247003 RBM27Q9P2N5 1060 aaKnown RBP17.96■□□□□ 0.47
DDX49-201ENST00000247003 RREB1Q92766 1687 aa17.96■□□□□ 0.47
DDX49-201ENST00000247003 WASHC4Q2M389 1173 aa17.95■□□□□ 0.46
DDX49-201ENST00000247003 LARP1BQ659C4 914 aaKnown RBP17.95■□□□□ 0.46
DDX49-201ENST00000247003 BARGINQ6ZT62 677 aa17.95■□□□□ 0.46
DDX49-201ENST00000247003 USP48Q86UV5 1035 aa17.95■□□□□ 0.46
DDX49-201ENST00000247003 ZNF34Q8IZ26 560 aa17.95■□□□□ 0.46
DDX49-201ENST00000247003 RIPOR2Q9Y4F9 1068 aa17.95■□□□□ 0.46
DDX49-201ENST00000247003 HSPD1P10809 573 aaKnown RBP17.95■□□□□ 0.46
DDX49-201ENST00000247003 EIF5P55010 431 aaKnown RBP17.95■□□□□ 0.46
DDX49-201ENST00000247003 ST3GAL1Q11201 340 aa17.95■□□□□ 0.46
DDX49-201ENST00000247003 ZSCAN25Q6NSZ9 544 aa17.95■□□□□ 0.46
DDX49-201ENST00000247003 SYNE4Q8N205 404 aa17.95■□□□□ 0.46
DDX49-201ENST00000247003 TMEM63CQ9P1W3 806 aa17.95■□□□□ 0.46
DDX49-201ENST00000247003 MTMR6Q9Y217 621 aa17.95■□□□□ 0.46
DDX49-201ENST00000247003 LRP5O75197 1615 aa17.95■□□□□ 0.46
DDX49-201ENST00000247003 MYH7P12883 1935 aa17.94■□□□□ 0.46
DDX49-201ENST00000247003 SLIT2O94813 1529 aa17.94■□□□□ 0.46
DDX49-201ENST00000247003 UBN2Q6ZU65 1347 aa17.94■□□□□ 0.46
DDX49-201ENST00000247003 LOC102724428A0A0B4J2F2 783 aa17.94■□□□□ 0.46
DDX49-201ENST00000247003 CRKLP46109 303 aaKnown RBP17.94■□□□□ 0.46
DDX49-201ENST00000247003 SIK1P57059 783 aa17.94■□□□□ 0.46
DDX49-201ENST00000247003 Q6ZUG5 572 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms