RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 IVLP07476 585 aa22.75■■□□□ 1.23
SOX4-201ENST00000244745 GBP2P32456 591 aaPredicted RBP22.75■■□□□ 1.23
SOX4-201ENST00000244745 RRAGBQ5VZM2 374 aa22.75■■□□□ 1.23
SOX4-201ENST00000244745 RAB34Q9BZG1 259 aa22.75■■□□□ 1.23
SOX4-201ENST00000244745 ARFGAP3Q9NP61 516 aa22.75■■□□□ 1.23
SOX4-201ENST00000244745 RSPH14Q9UHP6 348 aa22.75■■□□□ 1.23
SOX4-201ENST00000244745 WTAPQ15007 396 aa22.75■■□□□ 1.23
SOX4-201ENST00000244745 CCDC96Q2M329 555 aa22.75■■□□□ 1.23
SOX4-201ENST00000244745 MNAT1P51948 309 aa22.75■■□□□ 1.23
SOX4-201ENST00000244745 MAST1Q9Y2H9 1570 aa22.74■■□□□ 1.23
SOX4-201ENST00000244745 CWF19L2Q2TBE0 894 aaKnown RBP22.74■■□□□ 1.23
SOX4-201ENST00000244745 ANKRD18AQ8IVF6 992 aa22.74■■□□□ 1.23
SOX4-201ENST00000244745 PAG1Q9NWQ8 432 aa22.74■■□□□ 1.23
SOX4-201ENST00000244745 VPS36Q86VN1 386 aa22.74■■□□□ 1.23
SOX4-201ENST00000244745 CALML4Q96GE6 196 aa22.74■■□□□ 1.23
SOX4-201ENST00000244745 NPATQ14207 1427 aa22.74■■□□□ 1.23
SOX4-201ENST00000244745 SOS1Q07889 1333 aaPredicted RBP22.74■■□□□ 1.23
SOX4-201ENST00000244745 TCP11L1Q9NUJ3 509 aa22.74■■□□□ 1.23
SOX4-201ENST00000244745 RNF216Q9NWF9 866 aaPredicted RBP22.74■■□□□ 1.23
SOX4-201ENST00000244745 AKAP4Q5JQC9 854 aa22.73■■□□□ 1.23
SOX4-201ENST00000244745 WWC2Q6AWC2 1192 aa22.73■■□□□ 1.23
SOX4-201ENST00000244745 LMBR1LQ6UX01 489 aa22.73■■□□□ 1.23
SOX4-201ENST00000244745 G2E3Q7L622 706 aa22.73■■□□□ 1.23
SOX4-201ENST00000244745 PRC1O43663 620 aa22.73■■□□□ 1.23
SOX4-201ENST00000244745 FAM114A1Q8IWE2 563 aa22.73■■□□□ 1.23
SOX4-201ENST00000244745 KAT14Q9H8E8 782 aa22.73■■□□□ 1.23
SOX4-201ENST00000244745 RIMS2Q9UQ26 1411 aa22.73■■□□□ 1.23
SOX4-201ENST00000244745 LMOD1P29536 600 aaPredicted RBP22.73■■□□□ 1.23
SOX4-201ENST00000244745 FEZ1Q99689 392 aa22.73■■□□□ 1.23
SOX4-201ENST00000244745 TRIM35Q9UPQ4 493 aa22.73■■□□□ 1.23
SOX4-201ENST00000244745 SPTLC2O15270 562 aa22.72■■□□□ 1.23
SOX4-201ENST00000244745 CCDC40Q4G0X9 1142 aa22.72■■□□□ 1.23
SOX4-201ENST00000244745 TRIM47Q96LD4 638 aa22.72■■□□□ 1.23
SOX4-201ENST00000244745 TSPY2A6NKD2 308 aa22.72■■□□□ 1.23
SOX4-201ENST00000244745 PUS7Q96PZ0 661 aaKnown RBP22.72■■□□□ 1.23
SOX4-201ENST00000244745 ZPR1O75312 459 aa22.72■■□□□ 1.23
SOX4-201ENST00000244745 AMPD3Q01432 767 aa22.72■■□□□ 1.23
SOX4-201ENST00000244745 PYM1Q9BRP8 204 aaKnown RBP22.72■■□□□ 1.23
SOX4-201ENST00000244745 VAT1LQ9HCJ6 419 aa22.72■■□□□ 1.23
SOX4-201ENST00000244745 KIF5BP33176 963 aa22.72■■□□□ 1.23
SOX4-201ENST00000244745 CRACR2BQ8N4Y2 399 aaPredicted RBP22.72■■□□□ 1.23
SOX4-201ENST00000244745 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.72■■□□□ 1.23
SOX4-201ENST00000244745 ZFYP08048 801 aaPredicted RBP22.72■■□□□ 1.23
SOX4-201ENST00000244745 KIF21AQ7Z4S6 1674 aa22.71■■□□□ 1.23
SOX4-201ENST00000244745 MAP3K5Q99683 1374 aa22.71■■□□□ 1.23
SOX4-201ENST00000244745 PTPDC1A2A3K4 754 aa22.71■■□□□ 1.23
SOX4-201ENST00000244745 HLTFQ14527 1009 aaKnown RBP eCLIP22.71■■□□□ 1.23
SOX4-201ENST00000244745 IDEP14735 1019 aa22.71■■□□□ 1.23
SOX4-201ENST00000244745 MCM6Q14566 821 aa22.71■■□□□ 1.23
SOX4-201ENST00000244745 KRT23Q9C075 422 aa22.71■■□□□ 1.23
SOX4-201ENST00000244745 UBA7P41226 1012 aa22.71■■□□□ 1.23
SOX4-201ENST00000244745 GCC2Q8IWJ2 1684 aa22.71■■□□□ 1.23
SOX4-201ENST00000244745 TFCP2Q12800 502 aa22.7■■□□□ 1.23
SOX4-201ENST00000244745 RTN1Q16799 776 aa22.7■■□□□ 1.23
SOX4-201ENST00000244745 UQCRFS1P1P0C7P4 283 aa22.7■■□□□ 1.22
SOX4-201ENST00000244745 CHRNA2Q15822 529 aa22.7■■□□□ 1.22
SOX4-201ENST00000244745 CTAGE1Q96RT6 745 aa22.7■■□□□ 1.22
SOX4-201ENST00000244745 IFNKQ9P0W0 207 aa22.7■■□□□ 1.22
SOX4-201ENST00000244745 TMCO5BA8MYB1 307 aa22.69■■□□□ 1.22
SOX4-201ENST00000244745 RMND1Q9NWS8 449 aa22.69■■□□□ 1.22
SOX4-201ENST00000244745 SLC4A4Q9Y6R1 1079 aa22.69■■□□□ 1.22
SOX4-201ENST00000244745 NAA15Q9BXJ9 866 aaKnown RBP22.69■■□□□ 1.22
SOX4-201ENST00000244745 TNRQ92752 1358 aa22.69■■□□□ 1.22
SOX4-201ENST00000244745 LRRC59Q96AG4 307 aaKnown RBP22.69■■□□□ 1.22
SOX4-201ENST00000244745 FLT4P35916 1363 aa22.69■■□□□ 1.22
SOX4-201ENST00000244745 MAATS1Q7Z4T9 603 aa22.69■■□□□ 1.22
SOX4-201ENST00000244745 BICC1Q9H694 974 aaKnown RBP22.69■■□□□ 1.22
SOX4-201ENST00000244745 EXOC1Q9NV70 894 aa22.69■■□□□ 1.22
SOX4-201ENST00000244745 PDE4BQ07343 736 aa22.69■■□□□ 1.22
SOX4-201ENST00000244745 NPC1L1Q9UHC9 1359 aa22.68■■□□□ 1.22
SOX4-201ENST00000244745 SYT10Q6XYQ8 523 aa22.68■■□□□ 1.22
SOX4-201ENST00000244745 CTAGE15A4D2H0 777 aa22.68■■□□□ 1.22
SOX4-201ENST00000244745 CTAGE8P0CG41 777 aa22.68■■□□□ 1.22
SOX4-201ENST00000244745 CTAGE6Q86UF2 777 aa22.68■■□□□ 1.22
SOX4-201ENST00000244745 CTAGE4Q8IX94 777 aa22.68■■□□□ 1.22
SOX4-201ENST00000244745 ZNF518AQ6AHZ1 1483 aa22.67■■□□□ 1.22
SOX4-201ENST00000244745 ATP2B3Q16720 1220 aa22.67■■□□□ 1.22
SOX4-201ENST00000244745 DHX58Q96C10 678 aa22.67■■□□□ 1.22
SOX4-201ENST00000244745 RNF113AO15541 343 aaKnown RBP22.67■■□□□ 1.22
SOX4-201ENST00000244745 TRIM21P19474 475 aaKnown RBP22.67■■□□□ 1.22
SOX4-201ENST00000244745 IL15P40933 162 aaPredicted RBP22.67■■□□□ 1.22
SOX4-201ENST00000244745 STAT6P42226 847 aa22.67■■□□□ 1.22
SOX4-201ENST00000244745 NCKAP5LQ9HCH0 1330 aa22.67■■□□□ 1.22
SOX4-201ENST00000244745 SRRTQ9BXP5 876 aaKnown RBP22.67■■□□□ 1.22
SOX4-201ENST00000244745 HSF2BPO75031 334 aa22.67■■□□□ 1.22
SOX4-201ENST00000244745 CAPN2P17655 700 aa22.67■■□□□ 1.22
SOX4-201ENST00000244745 IRX3P78415 501 aaPredicted RBP22.67■■□□□ 1.22
SOX4-201ENST00000244745 IFIT1BQ5T764 474 aaKnown RBP22.67■■□□□ 1.22
SOX4-201ENST00000244745 EHBP1Q8NDI1 1231 aa22.67■■□□□ 1.22
SOX4-201ENST00000244745 TEX13AQ9BXU3 409 aaPredicted RBP22.67■■□□□ 1.22
SOX4-201ENST00000244745 SNX14Q9Y5W7 946 aa22.67■■□□□ 1.22
SOX4-201ENST00000244745 GOLGA6L10A0A0M3HER8 536 aa22.67■■□□□ 1.22
SOX4-201ENST00000244745 KIF20AO95235 890 aa22.67■■□□□ 1.22
SOX4-201ENST00000244745 GOLGA1Q92805 767 aa22.67■■□□□ 1.22
SOX4-201ENST00000244745 NPHP3Q7Z494 1330 aa22.66■■□□□ 1.22
SOX4-201ENST00000244745 U2AF2P26368 475 aaKnown RBP eCLIP22.66■■□□□ 1.22
SOX4-201ENST00000244745 SLC9C2Q5TAH2 1124 aa22.66■■□□□ 1.22
SOX4-201ENST00000244745 MYRIPQ8NFW9 859 aa22.66■■□□□ 1.22
SOX4-201ENST00000244745 ZBTB9Q96C00 473 aa22.66■■□□□ 1.22
SOX4-201ENST00000244745 MYO1BO43795 1136 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms