RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 DDX21Q9NR30 783 aaKnown RBP eCLIP12.2□□□□□ -0.46
TTC1-201ENST00000231238 PCDHGC3Q9UN70 934 aa12.2□□□□□ -0.46
TTC1-201ENST00000231238 SIPA1L3O60292 1781 aaPredicted RBP12.19□□□□□ -0.46
TTC1-201ENST00000231238 KDM2BQ8NHM5 1336 aa12.19□□□□□ -0.46
TTC1-201ENST00000231238 NRAPQ86VF7 1730 aa12.19□□□□□ -0.46
TTC1-201ENST00000231238 GGCXP38435 758 aa12.19□□□□□ -0.46
TTC1-201ENST00000231238 FNBP4Q8N3X1 1017 aaPredicted RBP12.19□□□□□ -0.46
TTC1-201ENST00000231238 TBC1D2Q9BYX2 928 aa12.19□□□□□ -0.46
TTC1-201ENST00000231238 HEG1Q9ULI3 1381 aa12.18□□□□□ -0.46
TTC1-201ENST00000231238 GNAI3P08754 354 aa12.18□□□□□ -0.46
TTC1-201ENST00000231238 RIC3Q7Z5B4 369 aa12.18□□□□□ -0.46
TTC1-201ENST00000231238 DNAAF4Q8WXU2 420 aa12.18□□□□□ -0.46
TTC1-201ENST00000231238 SRCIN1Q9C0H9 1055 aa12.18□□□□□ -0.46
TTC1-201ENST00000231238 PI4KAP2A4QPH2 592 aa12.17□□□□□ -0.46
TTC1-201ENST00000231238 RGS3P49796 1198 aa12.17□□□□□ -0.46
TTC1-201ENST00000231238 NEXNQ0ZGT2 675 aa12.17□□□□□ -0.46
TTC1-201ENST00000231238 HDAC1Q13547 482 aaPredicted RBP12.17□□□□□ -0.46
TTC1-201ENST00000231238 NPM2Q86SE8 214 aaKnown RBP12.17□□□□□ -0.46
TTC1-201ENST00000231238 PI4KAP1Q8N8J0 262 aa12.17□□□□□ -0.46
TTC1-201ENST00000231238 PIGBQ92521 554 aa12.17□□□□□ -0.46
TTC1-201ENST00000231238 SYMPKQ92797 1274 aaKnown RBP12.17□□□□□ -0.46
TTC1-201ENST00000231238 TEX13AQ9BXU3 409 aaPredicted RBP12.17□□□□□ -0.46
TTC1-201ENST00000231238 PRDM9Q9NQV7 894 aa12.17□□□□□ -0.46
TTC1-201ENST00000231238 USP16Q9Y5T5 823 aa12.17□□□□□ -0.46
TTC1-201ENST00000231238 AFF2P51816 1311 aa12.17□□□□□ -0.46
TTC1-201ENST00000231238 RGS12O14924 1447 aa12.17□□□□□ -0.46
TTC1-201ENST00000231238 GNAI2P04899 355 aa12.16□□□□□ -0.46
TTC1-201ENST00000231238 FDX1P10109 184 aa12.16□□□□□ -0.46
TTC1-201ENST00000231238 PROSER3Q2NL68 480 aa12.16□□□□□ -0.46
TTC1-201ENST00000231238 Q3C1V9 767 aa12.16□□□□□ -0.46
TTC1-201ENST00000231238 EMID1Q96A84 441 aaPredicted RBP12.16□□□□□ -0.46
TTC1-201ENST00000231238 ACSBG1Q96GR2 724 aa12.16□□□□□ -0.46
TTC1-201ENST00000231238 LRP6O75581 1613 aa12.16□□□□□ -0.46
TTC1-201ENST00000231238 BCL9LQ86UU0 1499 aa12.16□□□□□ -0.46
TTC1-201ENST00000231238 CACNA1FO60840 1977 aa12.15□□□□□ -0.46
TTC1-201ENST00000231238 HMMRO75330 724 aa12.15□□□□□ -0.46
TTC1-201ENST00000231238 STARD3NLO95772 234 aa12.15□□□□□ -0.46
TTC1-201ENST00000231238 UBTFL1P0CB47 393 aaPredicted RBP12.15□□□□□ -0.46
TTC1-201ENST00000231238 KSR2Q6VAB6 950 aa12.15□□□□□ -0.46
TTC1-201ENST00000231238 XAGE3Q8WTP9 111 aa12.15□□□□□ -0.46
TTC1-201ENST00000231238 MEIS3Q99687 375 aa12.15□□□□□ -0.46
TTC1-201ENST00000231238 ASAP1Q9ULH1 1129 aa12.15□□□□□ -0.46
TTC1-201ENST00000231238 MAP3K2Q9Y2U5 619 aa12.15□□□□□ -0.46
TTC1-201ENST00000231238 ZNF330Q9Y3S2 320 aaPredicted RBP12.15□□□□□ -0.46
TTC1-201ENST00000231238 SHANK3Q9BYB0 1731 aa12.15□□□□□ -0.46
TTC1-201ENST00000231238 KAT6BQ8WYB5 2073 aa12.15□□□□□ -0.46
TTC1-201ENST00000231238 COPS6Q7L5N1 327 aa12.14□□□□□ -0.47
TTC1-201ENST00000231238 MARCH10Q8NA82 808 aaPredicted RBP12.14□□□□□ -0.47
TTC1-201ENST00000231238 ARXQ96QS3 562 aa12.14□□□□□ -0.47
TTC1-201ENST00000231238 PRKD2Q9BZL6 878 aa12.14□□□□□ -0.47
TTC1-201ENST00000231238 KDM4CQ9H3R0 1056 aa12.14□□□□□ -0.47
TTC1-201ENST00000231238 TRPC5Q9UL62 973 aaPredicted RBP12.14□□□□□ -0.47
TTC1-201ENST00000231238 HDAC5Q9UQL6 1122 aa12.14□□□□□ -0.47
TTC1-201ENST00000231238 WNK3Q9BYP7 1800 aa12.14□□□□□ -0.47
TTC1-201ENST00000231238 ERBB4Q15303 1308 aa12.14□□□□□ -0.47
TTC1-201ENST00000231238 PXDNLA1KZ92 1463 aa12.14□□□□□ -0.47
TTC1-201ENST00000231238 PIP4K2AP48426 406 aaPredicted RBP12.14□□□□□ -0.47
TTC1-201ENST00000231238 MSS51Q4VC12 460 aa12.14□□□□□ -0.47
TTC1-201ENST00000231238 RPAP2Q8IXW5 612 aaPredicted RBP12.14□□□□□ -0.47
TTC1-201ENST00000231238 ANKLE1Q8NAG6 615 aa12.14□□□□□ -0.47
TTC1-201ENST00000231238 ATG3Q9NT62 314 aa12.14□□□□□ -0.47
TTC1-201ENST00000231238 C9orf78Q9NZ63 289 aaPredicted RBP12.14□□□□□ -0.47
TTC1-201ENST00000231238 PLA2G2CQ5R387 149 aa12.13□□□□□ -0.47
TTC1-201ENST00000231238 GCC1Q96CN9 775 aa12.13□□□□□ -0.47
TTC1-201ENST00000231238 GJD4Q96KN9 370 aaPredicted RBP12.13□□□□□ -0.47
TTC1-201ENST00000231238 USB1Q9BQ65 265 aaKnown RBP12.13□□□□□ -0.47
TTC1-201ENST00000231238 BCL11AQ9H165 835 aa12.13□□□□□ -0.47
TTC1-201ENST00000231238 PDZRN3Q9UPQ7 1066 aa12.13□□□□□ -0.47
TTC1-201ENST00000231238 BCL9O00512 1426 aa12.13□□□□□ -0.47
TTC1-201ENST00000231238 C5P01031 1676 aa12.12□□□□□ -0.47
TTC1-201ENST00000231238 ANKRD44Q8N8A2 993 aa12.12□□□□□ -0.47
TTC1-201ENST00000231238 ADCY9O60503 1353 aa12.11□□□□□ -0.47
TTC1-201ENST00000231238 ALDH1L1O75891 902 aa12.11□□□□□ -0.47
TTC1-201ENST00000231238 A1BGP04217 495 aa12.11□□□□□ -0.47
TTC1-201ENST00000231238 BEND3Q5T5X7 828 aa12.11□□□□□ -0.47
TTC1-201ENST00000231238 ANKRD45Q5TZF3 282 aa12.11□□□□□ -0.47
TTC1-201ENST00000231238 RSBN1LQ6PCB5 846 aaPredicted RBP12.11□□□□□ -0.47
TTC1-201ENST00000231238 SKAP1Q86WV1 359 aa12.11□□□□□ -0.47
TTC1-201ENST00000231238 DNAJC10Q8IXB1 793 aa12.11□□□□□ -0.47
TTC1-201ENST00000231238 LINS1Q8NG48 757 aa12.11□□□□□ -0.47
TTC1-201ENST00000231238 SMARCC1Q92922 1105 aaPredicted RBP12.11□□□□□ -0.47
TTC1-201ENST00000231238 TOGARAM1Q9Y4F4 1720 aa12.11□□□□□ -0.47
TTC1-201ENST00000231238 KCPQ6ZWJ8 1503 aa12.11□□□□□ -0.47
TTC1-201ENST00000231238 MYSM1Q5VVJ2 828 aa12.1□□□□□ -0.47
TTC1-201ENST00000231238 CEP85Q6P2H3 762 aa12.1□□□□□ -0.47
TTC1-201ENST00000231238 KIF6Q6ZMV9 814 aa12.1□□□□□ -0.47
TTC1-201ENST00000231238 MYD88Q99836 296 aa12.1□□□□□ -0.47
TTC1-201ENST00000231238 FAM117AQ9C073 453 aa12.1□□□□□ -0.47
TTC1-201ENST00000231238 QTRT2Q9H974 415 aaKnown RBP12.1□□□□□ -0.47
TTC1-201ENST00000231238 LRRFIP2Q9Y608 721 aaKnown RBP12.1□□□□□ -0.47
TTC1-201ENST00000231238 ATP10DQ9P241 1426 aa12.1□□□□□ -0.47
TTC1-201ENST00000231238 SPTLC1O15269 473 aa12.09□□□□□ -0.47
TTC1-201ENST00000231238 DIXDC1Q155Q3 683 aa12.09□□□□□ -0.47
TTC1-201ENST00000231238 SMC5Q8IY18 1101 aa12.09□□□□□ -0.47
TTC1-201ENST00000231238 PLBD2Q8NHP8 589 aa12.09□□□□□ -0.47
TTC1-201ENST00000231238 V9GY48 417 aaPredicted RBP12.09□□□□□ -0.47
TTC1-201ENST00000231238 LAMB4A4D0S4 1761 aa12.09□□□□□ -0.47
TTC1-201ENST00000231238 DOT1LQ8TEK3 1739 aa12.09□□□□□ -0.47
TTC1-201ENST00000231238 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.09□□□□□ -0.47
TTC1-201ENST00000231238 PAPPAQ13219 1627 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms