RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 MROH5Q6ZUA9 1318 aa17.99■□□□□ 0.47
CCDC47-201ENST00000225726 CD2BP2O95400 341 aaKnown RBP17.99■□□□□ 0.47
CCDC47-201ENST00000225726 ATP2B3Q16720 1220 aa17.99■□□□□ 0.47
CCDC47-201ENST00000225726 SLC27A3Q5K4L6 730 aa17.99■□□□□ 0.47
CCDC47-201ENST00000225726 CCDC158Q5M9N0 1113 aa17.99■□□□□ 0.47
CCDC47-201ENST00000225726 EDC3Q96F86 508 aaKnown RBP17.99■□□□□ 0.47
CCDC47-201ENST00000225726 NYXQ9GZU5 481 aa17.99■□□□□ 0.47
CCDC47-201ENST00000225726 ARAP2Q8WZ64 1704 aa17.98■□□□□ 0.47
CCDC47-201ENST00000225726 LRRC4BQ9NT99 713 aa17.98■□□□□ 0.47
CCDC47-201ENST00000225726 ERFEQ4G0M1 354 aa17.98■□□□□ 0.47
CCDC47-201ENST00000225726 PKNOX2Q96KN3 472 aa17.98■□□□□ 0.47
CCDC47-201ENST00000225726 FAM227BQ96M60 508 aa17.98■□□□□ 0.47
CCDC47-201ENST00000225726 ST18O60284 1047 aa17.97■□□□□ 0.47
CCDC47-201ENST00000225726 IFIT1P09914 478 aaKnown RBP17.97■□□□□ 0.47
CCDC47-201ENST00000225726 GORABQ5T7V8 394 aa17.97■□□□□ 0.47
CCDC47-201ENST00000225726 ANTXR1Q9H6X2 564 aa17.97■□□□□ 0.47
CCDC47-201ENST00000225726 ADORA1P30542 326 aa17.97■□□□□ 0.47
CCDC47-201ENST00000225726 TTC39AQ5SRH9 613 aa17.97■□□□□ 0.47
CCDC47-201ENST00000225726 SETDB2Q96T68 719 aa17.97■□□□□ 0.47
CCDC47-201ENST00000225726 PAG1Q9NWQ8 432 aa17.97■□□□□ 0.47
CCDC47-201ENST00000225726 PALD1Q9ULE6 856 aa17.97■□□□□ 0.47
CCDC47-201ENST00000225726 UBR3Q6ZT12 1888 aa17.97■□□□□ 0.47
CCDC47-201ENST00000225726 ADRA2BP18089 450 aa17.97■□□□□ 0.47
CCDC47-201ENST00000225726 TRAPPC3LQ5T215 181 aa17.97■□□□□ 0.47
CCDC47-201ENST00000225726 BICDL1Q6ZP65 573 aa17.97■□□□□ 0.47
CCDC47-201ENST00000225726 AMIGO3Q86WK7 504 aa17.97■□□□□ 0.47
CCDC47-201ENST00000225726 KBTBD3Q8NAB2 608 aa17.97■□□□□ 0.47
CCDC47-201ENST00000225726 SLKQ9H2G2 1235 aaPredicted RBP17.97■□□□□ 0.47
CCDC47-201ENST00000225726 TRIM37O94972 964 aa17.96■□□□□ 0.47
CCDC47-201ENST00000225726 PDE8BO95263 885 aa17.96■□□□□ 0.47
CCDC47-201ENST00000225726 SLC10A5Q5PT55 438 aa17.96■□□□□ 0.47
CCDC47-201ENST00000225726 MED23Q9ULK4 1368 aa17.96■□□□□ 0.47
CCDC47-201ENST00000225726 A0A0D9SFI3 127 aa17.96■□□□□ 0.47
CCDC47-201ENST00000225726 SEC31BQ9NQW1 1179 aa17.96■□□□□ 0.47
CCDC47-201ENST00000225726 NDUFB9Q9Y6M9 179 aa17.96■□□□□ 0.47
CCDC47-201ENST00000225726 CCDC171Q6TFL3 1326 aa17.96■□□□□ 0.47
CCDC47-201ENST00000225726 RFC4P35249 363 aa17.96■□□□□ 0.47
CCDC47-201ENST00000225726 MPHOSPH8Q99549 860 aa17.96■□□□□ 0.47
CCDC47-201ENST00000225726 IGHMBP2P38935 993 aaKnown RBP17.95■□□□□ 0.46
CCDC47-201ENST00000225726 SF3B3Q15393 1217 aaKnown RBP17.95■□□□□ 0.46
CCDC47-201ENST00000225726 DDX46Q7L014 1031 aaKnown RBP17.95■□□□□ 0.46
CCDC47-201ENST00000225726 GOLIM4O00461 696 aa17.95■□□□□ 0.46
CCDC47-201ENST00000225726 HMGB2P26583 209 aaKnown RBP17.95■□□□□ 0.46
CCDC47-201ENST00000225726 PUM3Q15397 648 aaKnown RBP17.95■□□□□ 0.46
CCDC47-201ENST00000225726 PTH1RQ03431 593 aa17.94■□□□□ 0.46
CCDC47-201ENST00000225726 SPRYD3Q8NCJ5 442 aa17.94■□□□□ 0.46
CCDC47-201ENST00000225726 CDC5LQ99459 802 aaKnown RBP17.94■□□□□ 0.46
CCDC47-201ENST00000225726 PHF14O94880 888 aa17.94■□□□□ 0.46
CCDC47-201ENST00000225726 GTF2E1P29083 439 aaPredicted RBP17.93■□□□□ 0.46
CCDC47-201ENST00000225726 NBPF5PQ86XG9 351 aaPredicted RBP17.93■□□□□ 0.46
CCDC47-201ENST00000225726 ZNF512BQ96KM6 892 aaPredicted RBP17.93■□□□□ 0.46
CCDC47-201ENST00000225726 FGFR2P21802 821 aa17.93■□□□□ 0.46
CCDC47-201ENST00000225726 LPIN2Q92539 896 aa17.93■□□□□ 0.46
CCDC47-201ENST00000225726 SNX14Q9Y5W7 946 aa17.93■□□□□ 0.46
CCDC47-201ENST00000225726 KCNB2Q92953 911 aa17.92■□□□□ 0.46
CCDC47-201ENST00000225726 MAP4K1Q92918 833 aa17.92■□□□□ 0.46
CCDC47-201ENST00000225726 NEK4P51957 841 aa17.92■□□□□ 0.46
CCDC47-201ENST00000225726 TPTE2Q6XPS3 522 aa17.92■□□□□ 0.46
CCDC47-201ENST00000225726 SLC5A1P13866 664 aa17.91■□□□□ 0.46
CCDC47-201ENST00000225726 C3orf67Q6ZVT6 689 aa17.91■□□□□ 0.46
CCDC47-201ENST00000225726 MCM2P49736 904 aa17.91■□□□□ 0.46
CCDC47-201ENST00000225726 CARMIL3Q8ND23 1372 aa17.91■□□□□ 0.46
CCDC47-201ENST00000225726 A0A1B0GUL6 1792 aa17.91■□□□□ 0.46
CCDC47-201ENST00000225726 SSFA2P28290 1259 aa17.91■□□□□ 0.46
CCDC47-201ENST00000225726 LRRFIP1Q32MZ4 808 aaKnown RBP17.91■□□□□ 0.46
CCDC47-201ENST00000225726 MCMDC2Q4G0Z9 681 aa17.91■□□□□ 0.46
CCDC47-201ENST00000225726 ZNF589Q86UQ0 364 aaPredicted RBP17.91■□□□□ 0.46
CCDC47-201ENST00000225726 HELLSQ9NRZ9 838 aa17.91■□□□□ 0.46
CCDC47-201ENST00000225726 CHMP5Q9NZZ3 219 aa17.91■□□□□ 0.46
CCDC47-201ENST00000225726 COL4A1P02462 1669 aa17.9■□□□□ 0.46
CCDC47-201ENST00000225726 ANKRD18AQ8IVF6 992 aa17.9■□□□□ 0.46
CCDC47-201ENST00000225726 RBM8AQ9Y5S9 174 aaKnown RBP17.9■□□□□ 0.46
CCDC47-201ENST00000225726 AKAP11Q9UKA4 1901 aa17.9■□□□□ 0.46
CCDC47-201ENST00000225726 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.9■□□□□ 0.46
CCDC47-201ENST00000225726 RXRBP28702 533 aa17.9■□□□□ 0.46
CCDC47-201ENST00000225726 DDIT3P35638 169 aa17.9■□□□□ 0.46
CCDC47-201ENST00000225726 NECTIN1Q15223 517 aa17.9■□□□□ 0.46
CCDC47-201ENST00000225726 HELBQ8NG08 1087 aaPredicted RBP17.9■□□□□ 0.46
CCDC47-201ENST00000225726 HSP90AA1P07900 732 aaKnown RBP17.89■□□□□ 0.46
CCDC47-201ENST00000225726 UQCRFS1P1P0C7P4 283 aa17.89■□□□□ 0.46
CCDC47-201ENST00000225726 FKBP4Q02790 459 aaKnown RBP eCLIP17.89■□□□□ 0.46
CCDC47-201ENST00000225726 ARID4AP29374 1257 aaPredicted RBP17.89■□□□□ 0.45
CCDC47-201ENST00000225726 SCARF1Q14162 830 aa17.89■□□□□ 0.45
CCDC47-201ENST00000225726 NLRP3Q96P20 1036 aa17.89■□□□□ 0.45
CCDC47-201ENST00000225726 RNF113AO15541 343 aaKnown RBP17.89■□□□□ 0.45
CCDC47-201ENST00000225726 TAF5LO75529 589 aa17.89■□□□□ 0.45
CCDC47-201ENST00000225726 TXNRD1Q16881 649 aa17.89■□□□□ 0.45
CCDC47-201ENST00000225726 ZMYM1Q5SVZ6 1142 aa17.89■□□□□ 0.45
CCDC47-201ENST00000225726 PRPF40BQ6NWY9 871 aaKnown RBP17.89■□□□□ 0.45
CCDC47-201ENST00000225726 RASEFQ8IZ41 740 aa17.89■□□□□ 0.45
CCDC47-201ENST00000225726 KCNJ4P48050 445 aa17.88■□□□□ 0.45
CCDC47-201ENST00000225726 ZAP70P43403 619 aa17.88■□□□□ 0.45
CCDC47-201ENST00000225726 CHRNDQ07001 517 aa17.88■□□□□ 0.45
CCDC47-201ENST00000225726 CCDC102BQ68D86 513 aa17.88■□□□□ 0.45
CCDC47-201ENST00000225726 BSDC1Q9NW68 430 aaPredicted RBP17.88■□□□□ 0.45
CCDC47-201ENST00000225726 CIZ1Q9ULV3 898 aaPredicted RBP17.88■□□□□ 0.45
CCDC47-201ENST00000225726 MYH7P12883 1935 aa17.88■□□□□ 0.45
CCDC47-201ENST00000225726 MCAMP43121 646 aa17.88■□□□□ 0.45
CCDC47-201ENST00000225726 NFIXQ14938 502 aa17.88■□□□□ 0.45
CCDC47-201ENST00000225726 ZFYP08048 801 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms