RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 PAG1Q9NWQ8 432 aa24.95■■□□□ 1.59
CCDC130-201ENST00000221554 ZNF500O60304 480 aaPredicted RBP24.95■■□□□ 1.58
CCDC130-201ENST00000221554 NEUROD6Q96NK8 337 aa24.95■■□□□ 1.58
CCDC130-201ENST00000221554 A1BGP04217 495 aa24.94■■□□□ 1.58
CCDC130-201ENST00000221554 LLPHQ9BRT6 129 aaKnown RBP24.94■■□□□ 1.58
CCDC130-201ENST00000221554 ISCA1Q9BUE6 129 aa24.94■■□□□ 1.58
CCDC130-201ENST00000221554 AKAP2Q9Y2D5 859 aa24.94■■□□□ 1.58
CCDC130-201ENST00000221554 EVA1CP58658 441 aa24.93■■□□□ 1.58
CCDC130-201ENST00000221554 TCIRG1Q13488 830 aa24.93■■□□□ 1.58
CCDC130-201ENST00000221554 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.93■■□□□ 1.58
CCDC130-201ENST00000221554 RNF214Q8ND24 703 aa24.93■■□□□ 1.58
CCDC130-201ENST00000221554 DDX54Q8TDD1 881 aaKnown RBP24.93■■□□□ 1.58
CCDC130-201ENST00000221554 GTF3C6Q969F1 213 aa24.93■■□□□ 1.58
CCDC130-201ENST00000221554 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.93■■□□□ 1.58
CCDC130-201ENST00000221554 ZKSCAN5Q9Y2L8 839 aa24.93■■□□□ 1.58
CCDC130-201ENST00000221554 TJP1Q07157 1748 aa24.92■■□□□ 1.58
CCDC130-201ENST00000221554 KIF3AQ9Y496 699 aa24.92■■□□□ 1.58
CCDC130-201ENST00000221554 ZMYM1Q5SVZ6 1142 aa24.91■■□□□ 1.58
CCDC130-201ENST00000221554 DDX46Q7L014 1031 aaKnown RBP24.91■■□□□ 1.58
CCDC130-201ENST00000221554 TMOD3Q9NYL9 352 aa24.91■■□□□ 1.58
CCDC130-201ENST00000221554 CEP126Q9P2H0 1117 aa24.91■■□□□ 1.58
CCDC130-201ENST00000221554 OFD1O75665 1012 aa24.9■■□□□ 1.58
CCDC130-201ENST00000221554 CYP21A2P08686 494 aa24.9■■□□□ 1.58
CCDC130-201ENST00000221554 PLA2G12BQ9BX93 195 aa24.9■■□□□ 1.58
CCDC130-201ENST00000221554 ZBTB3Q9H5J0 574 aa24.9■■□□□ 1.58
CCDC130-201ENST00000221554 IFIT1P09914 478 aaKnown RBP24.9■■□□□ 1.58
CCDC130-201ENST00000221554 TERF1P54274 439 aa24.9■■□□□ 1.58
CCDC130-201ENST00000221554 CCDC57Q2TAC2 916 aa24.9■■□□□ 1.58
CCDC130-201ENST00000221554 DHX32Q7L7V1 743 aaKnown RBP24.9■■□□□ 1.58
CCDC130-201ENST00000221554 ZSCAN16Q9H4T2 348 aaPredicted RBP24.9■■□□□ 1.58
CCDC130-201ENST00000221554 GOLIM4O00461 696 aa24.89■■□□□ 1.57
CCDC130-201ENST00000221554 Q6ZUG5 572 aa24.89■■□□□ 1.57
CCDC130-201ENST00000221554 ABCC12Q96J65 1359 aa24.88■■□□□ 1.57
CCDC130-201ENST00000221554 LRP6O75581 1613 aa24.88■■□□□ 1.57
CCDC130-201ENST00000221554 RNF113AO15541 343 aaKnown RBP24.88■■□□□ 1.57
CCDC130-201ENST00000221554 PCCAP05165 728 aaPredicted RBP24.88■■□□□ 1.57
CCDC130-201ENST00000221554 ZFYP08048 801 aaPredicted RBP24.88■■□□□ 1.57
CCDC130-201ENST00000221554 CCDC158Q5M9N0 1113 aa24.88■■□□□ 1.57
CCDC130-201ENST00000221554 KIF6Q6ZMV9 814 aa24.88■■□□□ 1.57
CCDC130-201ENST00000221554 A0A1B0GUL7 405 aa24.88■■□□□ 1.57
CCDC130-201ENST00000221554 NUTM2BA6NNL0 878 aaPredicted RBP24.88■■□□□ 1.57
CCDC130-201ENST00000221554 NUTM2EB1AL46 878 aaPredicted RBP24.88■■□□□ 1.57
CCDC130-201ENST00000221554 TIMM10P62072 90 aa24.88■■□□□ 1.57
CCDC130-201ENST00000221554 CDC37L1Q7L3B6 337 aa24.88■■□□□ 1.57
CCDC130-201ENST00000221554 NUTM2AQ8IVF1 878 aaPredicted RBP24.88■■□□□ 1.57
CCDC130-201ENST00000221554 TAF6LQ9Y6J9 622 aa24.88■■□□□ 1.57
CCDC130-201ENST00000221554 SHANK3Q9BYB0 1731 aa24.87■■□□□ 1.57
CCDC130-201ENST00000221554 STARD3NLO95772 234 aa24.87■■□□□ 1.57
CCDC130-201ENST00000221554 TPM2P07951 284 aa24.87■■□□□ 1.57
CCDC130-201ENST00000221554 HSP90B1P14625 803 aaKnown RBP24.87■■□□□ 1.57
CCDC130-201ENST00000221554 FGD1P98174 961 aa24.87■■□□□ 1.57
CCDC130-201ENST00000221554 GOLGA6L4A6NEF3 574 aa24.86■■□□□ 1.57
CCDC130-201ENST00000221554 PFKFB2O60825 505 aa24.86■■□□□ 1.57
CCDC130-201ENST00000221554 PTMAP06454 111 aaKnown RBP24.86■■□□□ 1.57
CCDC130-201ENST00000221554 HMGN5P82970 282 aaKnown RBP24.86■■□□□ 1.57
CCDC130-201ENST00000221554 CCDC129Q6ZRS4 1044 aa24.86■■□□□ 1.57
CCDC130-201ENST00000221554 TCEANC2Q96MN5 208 aa24.86■■□□□ 1.57
CCDC130-201ENST00000221554 SEC62Q99442 399 aaKnown RBP24.86■■□□□ 1.57
CCDC130-201ENST00000221554 FUCA2Q9BTY2 467 aa24.86■■□□□ 1.57
CCDC130-201ENST00000221554 CTNNA3Q9UI47 895 aa24.86■■□□□ 1.57
CCDC130-201ENST00000221554 CCDC192P0DO97 292 aa24.85■■□□□ 1.57
CCDC130-201ENST00000221554 AGXT2Q9BYV1 514 aa24.85■■□□□ 1.57
CCDC130-201ENST00000221554 LRRC24Q50LG9 513 aa24.85■■□□□ 1.57
CCDC130-201ENST00000221554 HSP90AB3PQ58FF7 597 aa24.85■■□□□ 1.57
CCDC130-201ENST00000221554 FBXL16Q8N461 479 aa24.85■■□□□ 1.57
CCDC130-201ENST00000221554 CFAP45Q9UL16 551 aa24.85■■□□□ 1.57
CCDC130-201ENST00000221554 STK3Q13188 491 aa24.84■■□□□ 1.57
CCDC130-201ENST00000221554 TTC6Q86TZ1 520 aa24.84■■□□□ 1.57
CCDC130-201ENST00000221554 ZBTB38Q8NAP3 1195 aaPredicted RBP24.84■■□□□ 1.57
CCDC130-201ENST00000221554 SMARCC2Q8TAQ2 1214 aa24.84■■□□□ 1.57
CCDC130-201ENST00000221554 SPATA32Q96LK8 384 aa24.84■■□□□ 1.57
CCDC130-201ENST00000221554 DDX19AQ9NUU7 478 aaKnown RBP24.84■■□□□ 1.57
CCDC130-201ENST00000221554 NDUFB9Q9Y6M9 179 aa24.84■■□□□ 1.57
CCDC130-201ENST00000221554 CSF1RP07333 972 aa24.83■■□□□ 1.57
CCDC130-201ENST00000221554 ATL3Q6DD88 541 aa24.83■■□□□ 1.57
CCDC130-201ENST00000221554 STRN4Q9NRL3 753 aa24.83■■□□□ 1.57
CCDC130-201ENST00000221554 CDHR2Q9BYE9 1310 aa24.83■■□□□ 1.57
CCDC130-201ENST00000221554 H3BQV1 296 aa24.82■■□□□ 1.56
CCDC130-201ENST00000221554 HSPD1P10809 573 aaKnown RBP24.82■■□□□ 1.56
CCDC130-201ENST00000221554 EXOSC10Q01780 885 aaKnown RBP24.82■■□□□ 1.56
CCDC130-201ENST00000221554 GORABQ5T7V8 394 aa24.82■■□□□ 1.56
CCDC130-201ENST00000221554 IFFO2Q5TF58 517 aa24.82■■□□□ 1.56
CCDC130-201ENST00000221554 NAA16Q6N069 864 aaPredicted RBP24.82■■□□□ 1.56
CCDC130-201ENST00000221554 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.82■■□□□ 1.56
CCDC130-201ENST00000221554 SPATA31A6Q5VVP1 1343 aa24.82■■□□□ 1.56
CCDC130-201ENST00000221554 KDM4AO75164 1064 aa24.82■■□□□ 1.56
CCDC130-201ENST00000221554 TTC39AQ5SRH9 613 aa24.82■■□□□ 1.56
CCDC130-201ENST00000221554 BRF1Q92994 677 aa24.82■■□□□ 1.56
CCDC130-201ENST00000221554 ZNF274Q96GC6 653 aaPredicted RBP24.82■■□□□ 1.56
CCDC130-201ENST00000221554 NUP62CLQ9H1M0 184 aa24.82■■□□□ 1.56
CCDC130-201ENST00000221554 MAP3K11Q16584 847 aa24.81■■□□□ 1.56
CCDC130-201ENST00000221554 TAF7LQ5H9L4 462 aa24.81■■□□□ 1.56
CCDC130-201ENST00000221554 ADAMTS2O95450 1211 aa24.8■■□□□ 1.56
CCDC130-201ENST00000221554 HCLS1P14317 486 aaPredicted RBP24.8■■□□□ 1.56
CCDC130-201ENST00000221554 IFIT5Q13325 482 aaKnown RBP24.8■■□□□ 1.56
CCDC130-201ENST00000221554 COL9A3Q14050 684 aaPredicted RBP24.8■■□□□ 1.56
CCDC130-201ENST00000221554 FERMT3Q86UX7 667 aa24.8■■□□□ 1.56
CCDC130-201ENST00000221554 ZNF594Q96JF6 807 aaPredicted RBP24.8■■□□□ 1.56
CCDC130-201ENST00000221554 TPM3P06753 285 aa24.8■■□□□ 1.56
CCDC130-201ENST00000221554 GIMAP6Q6P9H5 292 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms