RNA–Protein interactions for RNA: ENSMUST00000168878.7

Shroom3-204, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 5,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-204ENSMUST00000168878 TrdnE9Q9K5 693 aa19.27■□□□□ 0.67
Shroom3-204ENSMUST00000168878 DesP31001 469 aaKnown RBP19.27■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Syce1Q9D495 329 aa19.27■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Pik3ap1Q9EQ32 811 aa19.26■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Tagap1P0CAX8 505 aa19.26■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Mdm2P23804 489 aa19.26■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Fgfr1opQ66JX5 399 aa19.26■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Sugp2Q8CH09 1067 aa19.26■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Pola1P33609 1465 aa19.26■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Ttc12Q8BW49 704 aa19.26■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Acot9Q9R0X4 439 aaKnown RBP19.26■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Trappc8E9PWG2 1437 aa19.26■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Ccdc82Q6PG04 518 aa19.26■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Matr3Q8K310 846 aaKnown RBP19.26■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Kdm4cQ8VCD7 1054 aa19.26■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Hmgb1P63158 215 aaKnown RBP19.26■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Gbp8Q2V6D6 525 aa19.26■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Acsbg1Q99PU5 721 aa19.26■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Cpsf1Q9EPU4 1441 aaKnown RBP19.25■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Atp2b1G5E829 1220 aa19.25■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Tnnc1P19123 161 aa19.25■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Efcab2Q9CQ46 164 aa19.25■□□□□ 0.67
Shroom3-204ENSMUST00000168878 MarcksP26645 309 aaKnown RBP19.25■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Myo1bP46735 1107 aa19.25■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Terf2ipQ91VL8 393 aa19.25■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Nip7Q9CXK8 180 aaKnown RBP19.25■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Irx4Q9QY61 515 aa19.25■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Gm7347D3YYI9 267 aa19.25■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Opa1P58281 960 aa19.25■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Utp18Q5SSI6 552 aaKnown RBP19.25■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Rtn1Q8K0T0 780 aa19.25■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Gm3409A0A0G2JE67 319 aa19.24■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Stmn4P63042 189 aa19.24■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Mindy4Q3UQI9 744 aa19.24■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Fam170aQ66LM6 333 aa19.24■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Ythdc2B2RR83 1445 aaKnown RBP19.24■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Amotl2Q8K371 772 aa19.24■□□□□ 0.67
Shroom3-204ENSMUST00000168878 MthfsQ9D110 203 aa19.24■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Hmgb2P30681 210 aaKnown RBP19.24■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Pde3aQ9Z0X4 1141 aa19.24■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Calm1P0DP26 149 aaKnown RBP19.24■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Calm2P0DP27 149 aaKnown RBP19.24■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Calm3P0DP28 149 aaKnown RBP19.24■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Mex3cQ05A36 652 aaKnown RBP19.24■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Map3k11Q80XI6 850 aa19.24■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Dzip1Q8BMD2 852 aa19.24■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Map7d1A2AJI0 846 aa19.23■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Igbp1Q61249 340 aa19.23■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Capza3P70190 299 aa19.23■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Tmco5aQ9D9D5 303 aa19.23■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Gm28510A0A087WP28 240 aa19.23■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Bicc1Q99MQ1 977 aaKnown RBP19.23■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Fermt2Q8CIB5 680 aa19.23■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Ubxn1Q922Y1 297 aa19.23■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Cyp27a1Q9DBG1 533 aa19.23■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Exoc5Q3TPX4 708 aa19.22■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Tacc2Q9JJG0 1149 aa19.22■□□□□ 0.67
Shroom3-204ENSMUST00000168878 AdnpQ9Z103 1108 aaKnown RBP19.22■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Arfgap2Q99K28 520 aa19.22■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Frat1P70339 274 aa19.22■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Gm44503E9PYU5 387 aa19.22■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Dact3Q0PHV7 610 aa19.22■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Fam213aQ9CYH2 218 aa19.22■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Ccdc170D3YXL0 722 aa19.21■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Wdr93Q402B2 695 aa19.21■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Znf18Q810A1 556 aa19.21■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Nsd3Q6P2L6 1439 aa19.21■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Gnat2P50149 354 aa19.21■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Cep19Q9CQA8 163 aa19.21■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Six6os1Q9CTN5 574 aa19.21■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Mmp8O70138 465 aa19.21■□□□□ 0.67
Shroom3-204ENSMUST00000168878 SsbP32067 415 aaKnown RBP19.21■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Gas2l2Q5SSG4 860 aa19.21■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Plcd1Q8R3B1 756 aa19.21■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Clec11aO88200 328 aa19.21■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Ubash3aQ3V3E1 624 aa19.21■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Sdad1Q80UZ2 687 aaKnown RBP19.21■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Zc3h12cQ5DTV4 884 aa19.21■□□□□ 0.67
Shroom3-204ENSMUST00000168878 Mlh1Q9JK91 760 aa19.2■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Atp1a4Q9WV27 1032 aa19.2■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Oas2E9Q9A9 742 aa19.2■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Clcn1Q64347 994 aa19.2■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Lrsam1Q80ZI6 727 aa19.2■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Lmod1Q8BVA4 595 aa19.2■□□□□ 0.66
Shroom3-204ENSMUST00000168878 2310002L09RikQ9D7L5 217 aa19.2■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Anp32cQ64G17 123 aa19.2■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Bicd1Q8BR07 835 aa19.2■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Rps6kb1Q8BSK8 525 aa19.2■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Ptcd1Q8C2E4 695 aaKnown RBP19.2■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Dph6Q9CQ28 267 aa19.2■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Krt7Q9DCV7 457 aa19.2■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Zfp213E9QAW0 468 aa19.19■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Gtpbp4Q99ME9 634 aaKnown RBP19.19■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Gimap8Q75N62 688 aa19.19■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Pnpla2Q8BJ56 486 aa19.19■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Znf394Q9Z1D9 521 aa19.19■□□□□ 0.66
Shroom3-204ENSMUST00000168878 HellsQ60848 821 aa19.19■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Acnat2Q8BGG9 420 aa19.19■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Astn2Q80Z10 1352 aa19.19■□□□□ 0.66
Shroom3-204ENSMUST00000168878 Rnf216P58283 853 aa19.19■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms