RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Cachd1Q6PDJ1 1288 aa15.56■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Srp68Q8BMA6 625 aaKnown RBP15.56■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Sirt2Q8VDQ8 389 aa15.56■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Hps4Q99KG7 671 aa15.56■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Mei1Q9D4I2 1268 aa15.56■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Scn7aB1AYL1 1681 aa15.56■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Tjp1P39447 1745 aaKnown RBP15.55■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 FanciQ8K368 1330 aa15.55■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 ElnP54320 860 aa15.55■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Setdb2Q8C267 713 aa15.55■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Zfyve9A2A8R0 1397 aa15.54■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Pla2g2cP48076 150 aa15.54■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Angel2Q8K1C0 544 aa15.54■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Usp26Q99MX1 835 aa15.54■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Mtcl1Q3UHU5 1945 aa15.54■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Crb1Q8VHS2 1405 aa15.53■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Rock1P70335 1354 aa15.53■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Rasa1E9PYG6 1038 aa15.53■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Cops2P61202 443 aaKnown RBP15.53■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Ppp1r26Q6A025 1163 aa15.53■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Ncbp3Q8BZR9 615 aaKnown RBP15.53■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Gm7173A0A0G2JEB6 3132 aa15.53■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Rfx1P48377 963 aa15.52■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Myt1Q8CFC2 1127 aa15.52■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Ivns1abpQ920Q8 642 aa15.52■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Tktl2Q9D4D4 627 aa15.52■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 CemipQ8BI06 1361 aa15.51■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Wwc1Q5SXA9 1104 aa15.51■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Sik2Q8CFH6 931 aa15.51■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 CenpjQ569L8 1344 aa15.5■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Zmynd8A2A484 1235 aaKnown RBP15.5■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Phf12Q5SPL2 1003 aa15.5■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Tanc1Q0VGY8 1856 aa15.5■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Sos1Q62245 1319 aa15.49■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Il13ra1O09030 424 aa15.49■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Slc30a10Q3UVU3 470 aa15.49■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 HmcesQ8R1M0 353 aaKnown RBP15.49■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Atg3Q9CPX6 314 aa15.49■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Ptf1aQ9QX98 324 aa15.49■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Hoxc9P09633 260 aa15.48■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 PtgdrP70263 357 aa15.48■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Vil1Q62468 827 aa15.48■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 GorabQ8BRM2 368 aa15.48■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 4930572O03RikQ8C5Y0 211 aa15.48■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Gm17324Q8C6J8 137 aa15.48■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Katnal1Q8K0T4 488 aa15.48■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 RragcQ99K70 398 aa15.48■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Bcs1lQ9CZP5 418 aa15.48■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Exosc9Q9JHI7 438 aaKnown RBP15.48■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Celf2Q9Z0H4 508 aaKnown RBP15.48■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Kmt2eQ3UG20 1868 aa15.48■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Klhl34A2AI76 644 aa15.47■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Skor2A7M7C7 1008 aa15.47■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Pacs2Q3V3Q7 862 aa15.47■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Tsen34Q8BMZ5 316 aa15.47■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Plcg2Q8CIH5 1265 aa15.47■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Prr14lE9Q7C4 1971 aa15.47■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Olfr247E9PVJ7 320 aa15.46■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Olfr819K7N727 320 aa15.46■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Hmx1O70218 332 aa15.46■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Cxcl9P18340 126 aa15.46■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Apex1P28352 317 aaKnown RBP15.46■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Ankrd13cQ3UX43 541 aa15.46■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Slfnl1Q8BHW9 410 aa15.46■□□□□ 0.07
Hmgb1-202ENSMUST00000093196 Fam193bQ3U2K0 892 aa15.45■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Soga3Q6NZL0 945 aa15.45■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Q6PAC4 1279 aa15.45■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Dcaf5Q80T85 946 aa15.45■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 ThemisQ8BGW0 636 aa15.45■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 SowahcQ8C0J6 512 aa15.45■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 GneQ91WG8 722 aaKnown RBP15.45■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Jph1Q9ET80 660 aa15.45■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 CalcaP70160 136 aa15.44■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 EgflamQ4VBE4 1017 aa15.44■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Tmem164Q6PHN7 296 aa15.44■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Jmjd4Q8BFT6 427 aa15.44■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Pdzd3Q99MJ6 498 aa15.44■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Kndc1Q0KK55 1742 aa15.43■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Aplp2Q06335 707 aa15.43■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Znf784Q8BI69 297 aa15.43■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Pcdhgc3Q91XX1 934 aa15.43■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Gimap3Q99MI6 301 aa15.43■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Wdr70Q3TWF6 657 aa15.42■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 LpoQ5SW46 710 aa15.42■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Snapc1Q8K0S9 389 aa15.42■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Igf2bp3Q9CPN8 579 aaKnown RBP15.42■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Mxra7Q9CZH7 178 aa15.42■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 NinQ61043 2035 aa15.41■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Gm21663A0A0G2JE01 267 aa15.41■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Duxf3A0A0N4SV92 674 aa15.41■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Gm7361D3Z6R1 267 aa15.41■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 5031410I06RikE9Q4E0 267 aa15.41■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Gm1979E9QAN3 267 aa15.41■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Gm5862K7N5V5 267 aa15.41■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Gm10220K7N660 267 aa15.41■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Itgbl1Q8VDV0 494 aa15.41■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Mrc1Q61830 1456 aa15.4■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Simc1E9Q6E9 1354 aa15.4■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Itga6Q61739 1091 aa15.4■□□□□ 0.06
Hmgb1-202ENSMUST00000093196 Snd1Q78PY7 910 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms