RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Spata31d1bE9QA57 1361 aa29.29■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Kcnh4A2A5F7 1018 aa29.29■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Slc4a1P04919 929 aa29.29■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Plcb3P51432 1234 aaKnown RBP29.29■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Exosc10P56960 887 aaKnown RBP29.29■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 ApobrQ8VBT6 942 aa29.29■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 BrapQ99MP8 591 aa29.29■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Smarcc2Q6PDG5 1213 aa29.28■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Ano1Q8BHY3 960 aa29.28■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Cfap73J3QPZ5 306 aa29.27■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Clcn1Q64347 994 aa29.27■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Clca2Q8BG22 942 aa29.27■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 AidaQ8C4Q6 305 aa29.27■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Atad2Q8CDM1 1040 aa29.27■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Sipa1l3G3X9J0 1776 aa29.27■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 CgnP59242 1191 aa29.27■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Atp8a2P98200 1148 aa29.27■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Ndufa8Q9DCJ5 172 aa29.27■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Zeb2Q9R0G7 1215 aa29.27■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Mcm3P25206 812 aaKnown RBP29.26■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Zbtb22Q9Z0G7 638 aa29.26■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Hap1O35668 628 aa29.26■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Znf692Q3U381 531 aa29.26■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Cyp3a57D3YYZ0 503 aa29.25■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 TsksO54887 585 aa29.25■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 TnksQ6PFX9 1320 aa29.25■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Nav1Q8CH77 1875 aa29.25■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Usp42B2RQC2 1324 aaKnown RBP29.24■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Ncaph2Q8BSP2 607 aa29.24■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Ttc27Q8CD92 847 aa29.24■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Rbm17Q8JZX4 405 aaKnown RBP29.24■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Add3Q9QYB5 706 aaKnown RBP29.24■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 EzrP26040 586 aaKnown RBP29.23■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Lmbrd2Q8C561 694 aa29.23■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Ncoa5Q91W39 579 aaKnown RBP29.23■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Ftl2P49945 183 aa29.23■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Tpm2P58774 284 aa29.23■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Utp3Q9JI13 469 aaKnown RBP29.23■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Cyp19a1P28649 503 aa29.22■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Adcy5P84309 1262 aa29.22■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Mrpl44Q9CY73 333 aaKnown RBP29.22■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Hdac6Q9Z2V5 1149 aa29.22■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Pank2Q3U4S0 443 aa29.21■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Mindy4Q3UQI9 744 aa29.21■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Ltv1Q6NSQ7 470 aaKnown RBP29.21■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Rufy2Q8R4C2 606 aa29.21■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Arap2Q8BZ05 1703 aa29.21■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Pde4dQ01063 747 aa29.21■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Zfp317Q8C0Q5 607 aa29.21■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Csrnp1P59054 583 aa29.2■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Bach2P97303 839 aa29.2■■■□□ 2.27
Cldnd1-201ENSMUST00000023426 Usp25P57080 1055 aa29.2■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Pms1Q8K119 917 aa29.2■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Pes1Q9EQ61 584 aaKnown RBP29.2■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Brwd3A2AHJ4 1799 aa29.2■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Tnrc6cQ3UHC0 1690 aaKnown RBP29.19■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Hvcn1Q3U2S8 269 aa29.18■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Fam160b2Q80YR2 744 aa29.18■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Tmem67Q8BR76 992 aa29.18■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Nlrp3Q8R4B8 1033 aa29.18■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Trim59Q922Y2 403 aa29.18■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Carmil3Q3UFQ8 1375 aa29.18■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Ubash3aQ3V3E1 624 aa29.18■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Snx13Q6PHS6 957 aa29.18■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Zkscan8Q8BSL0 588 aa29.18■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Mtmr3Q8K296 1196 aa29.18■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 GptQ8QZR5 496 aa29.18■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Nip7Q9CXK8 180 aaKnown RBP29.18■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Kcnq5Q9JK45 933 aa29.18■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Tbc1d31Q6NXY1 996 aa29.17■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Dcaf5Q80T85 946 aa29.17■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 TnmdQ9EP64 317 aa29.17■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Zkscan7E9PVW1 718 aa29.16■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Lins1Q3U1D0 764 aa29.16■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Igflr1Q3U4N7 345 aa29.16■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Trim56Q80VI1 734 aaKnown RBP29.16■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Pnma3Q8JZW8 466 aa29.16■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Fkbp1aP26883 108 aaKnown RBP29.15■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Cfap157Q0VFX2 523 aa29.15■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Appbp2Q9DAX9 585 aa29.15■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 1700113H08RikE9Q9Q5 327 aa29.15■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Gpr182P43142 395 aa29.15■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Jmjd4Q8BFT6 427 aa29.15■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 ImmtQ8CAQ8 757 aaKnown RBP29.15■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 MetP16056 1379 aa29.15■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Cfap58B2RW38 873 aa29.14■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 BcanQ61361 883 aa29.14■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Adam1bQ8R534 806 aa29.14■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Riok1Q922Q2 567 aa29.14■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Akap11E9Q777 1895 aa29.14■■■□□ 2.26
Cldnd1-201ENSMUST00000023426 Cops6O88545 324 aa29.14■■■□□ 2.25
Cldnd1-201ENSMUST00000023426 Atp2b3Q0VF55 1220 aa29.14■■■□□ 2.25
Cldnd1-201ENSMUST00000023426 Adam1aQ60813 791 aa29.14■■■□□ 2.25
Cldnd1-201ENSMUST00000023426 Smim5Q8BT42 78 aa29.14■■■□□ 2.25
Cldnd1-201ENSMUST00000023426 Mx2Q9WVP9 655 aa29.14■■■□□ 2.25
Cldnd1-201ENSMUST00000023426 Wdr19Q3UGF1 1341 aa29.13■■■□□ 2.25
Cldnd1-201ENSMUST00000023426 Sik3Q6P4S6 1311 aa29.13■■■□□ 2.25
Cldnd1-201ENSMUST00000023426 Marf1Q8BJ34 1730 aaKnown RBP29.13■■■□□ 2.25
Cldnd1-201ENSMUST00000023426 Cspp1B2RX88 1205 aa29.13■■■□□ 2.25
Cldnd1-201ENSMUST00000023426 Tyro3P55144 880 aa29.13■■■□□ 2.25
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms