RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, human

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHANK2-219	ENST00000606715	FAM69A	Q5T7M9	428 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	RGS7BP	Q6MZT1	257 aa	Predicted RBP	10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	LILRA3	Q8N6C8	439 aa	Predicted RBP	10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	KCNG3	Q8TAE7	436 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	SEMA4C	Q9C0C4	833 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	WDR76	Q9H967	626 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	PLPP1	O14494	284 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	BMI1	P35226	326 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	PCBP4	P57723	403 aa	Known RBP	10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	HNF4G	Q14541	408 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	OR1C1	Q15619	314 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	ACTBL2	Q562R1	376 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	MBOAT2	Q6ZWT7	520 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	LRRC56	Q8IYG6	542 aa	Predicted RBP	10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	FAM71C	Q8NEG0	241 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	SLAMF9	Q96A28	289 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	PPA2	Q9H2U2	334 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	ASF1B	Q9NVP2	202 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	ONECUT1	Q9UBC0	465 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	IGHV3-64D	A0A0J9YX35	117 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	TMEM72	A0PK05	275 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	C5orf49	A4QMS7	147 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	DVL1	O14640	695 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	CXCL13	O43927	109 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	IL9	P15248	144 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	CPE	P16870	476 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	GPX2	P18283	190 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	DVL1P1	P54792	670 aa	Predicted RBP	10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	TNK1	Q13470	666 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	RPL22L1	Q6P5R6	122 aa	Known RBP	10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715		Q6ZS52	159 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	EGFL6	Q8IUX8	553 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	SEMA6D	Q8NFY4	1073 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	SUCNR1	Q9BXA5	334 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	RASD1	Q9Y272	281 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715		I6L893	689 aa	Predicted RBP	10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	GAPDHS	O14556	408 aa	Predicted RBP	10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	SH2D1B	O14796	132 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	GPRIN2	O60269	458 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	RPA2	P15927	270 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	HTR2B	P41595	481 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	RTL8B	Q17RB0	113 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	GLYR1	Q49A26	553 aa	Predicted RBP	10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	PRSS36	Q5K4E3	855 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	SYT9	Q86SS6	491 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	OR52N5	Q8NH56	324 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	TCTEX1D2	Q8WW35	142 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	SLC35A4	Q96G79	324 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	CSF3R	Q99062	836 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	CXorf36	Q9H7Y0	433 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	KLK8	O60259	260 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	GMDS	O60547	372 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	CTSL	P07711	333 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	MYF5	P13349	255 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	TAS2R19	P59542	299 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	KIRREL1	Q96J84	757 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	CHRNA9	Q9UGM1	479 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	TRGV5	A0A0B4J1U4	118 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715		A0A1B0GWA3	101 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	PPIH	O43447	177 aa	Known RBP	10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	GOSR1	O95249	250 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	CISD3	P0C7P0	127 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	FABP6	P51161	128 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	CDK5R2	Q13319	367 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	CCSMST1	Q4G0I0	132 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	XKR7	Q5GH72	579 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715		Q6ZTK2	550 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	CATSPERD	Q86XM0	798 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	B3GNT7	Q8NFL0	401 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	NANP	Q8TBE9	248 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	KCNJ15	Q99712	375 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	QRSL1	Q9H0R6	528 aa	Known RBP	10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	POMT2	Q9UKY4	750 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	WDR90	Q96KV7	1748 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	LCMT2	O60294	686 aa	Known RBP	10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	OR2J2	O76002	312 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	ZGLP1	P0C6A0	271 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	GM2A	P17900	193 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	TBXA2R	P21731	343 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	GIPR	P48546	466 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	SELENBP1	Q13228	472 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	ALKBH6	Q3KRA9	238 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	METAP1D	Q6UB28	335 aa	Predicted RBP	10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	OR2T11	Q8NH01	316 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	GABRG3	Q99928	467 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	SARG	Q9BW04	601 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	ERVMER34-1	Q9H9K5	563 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	KCNJ16	Q9NPI9	418 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	TNFRSF19	Q9NS68	423 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	SLC39A9	Q9NUM3	307 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715		A0A1W2PQL4	384 aa	Predicted RBP	10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715		K7EQS6	105 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	CD22	P20273	847 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	RPS16	P62249	146 aa	Known RBP	10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	TFF2	Q03403	129 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	HES3	Q5TGS1	186 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	COMMD7	Q86VX2	200 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	MZB1	Q8WU39	189 aa		10.09	□□□□□ -0.79
SHANK2-219	ENST00000606715	ZBTB8A	Q96BR9	441 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms