RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 YY1AP1Q9H869 796 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 IL1RAPQ9NPH3 570 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 NDUFAF4Q9P032 175 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 RHCGQ9UBD6 479 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 RCE1Q9Y256 329 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 WNK2Q9Y3S1 2297 aa14.11□□□□□ -0.15
SHKBP1-215ENST00000597649 A0A087WUJ7 227 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 TCRBV3S1A0A5B6 114 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 J3KTA2 159 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 SEMG1P04279 462 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 THRBP10828 461 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 RPS5P46782 204 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 CAPZA2P47755 286 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 SMIM11AP58511 58 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 PIGFQ07326 219 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 USP43Q70EL4 1123 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 C10orf67Q8IYJ2 551 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 ADGRG5Q8IZF4 528 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 TMEM123Q8N131 208 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 GPR137CQ8N3F9 429 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 MPP4Q96JB8 637 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 OXGR1Q96P68 337 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 OR2M2Q96R28 347 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 CHID1Q9BWS9 393 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 ZNF275Q9NSD4 429 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 FZR1Q9UM11 496 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 A4GNTQ9UNA3 340 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 GRIP1Q9Y3R0 1128 aa14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 PRKDCP78527 4128 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-215ENST00000597649 VWFP04275 2813 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 LOC105371242A0A075B767 164 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 ZNF99A8MXY4 864 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 M0R233 179 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 FZD7O75084 574 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 NCR1O76036 304 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 DIRAS1O95057 198 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 AHSA1O95433 338 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 TFP02787 698 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 MT-ND1P03886 318 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 H1F0P07305 194 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 ZNF14P17017 642 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 EPHA1P21709 976 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 ACHEP22303 614 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 TMEM33P57088 247 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 SPIBQ01892 262 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 TRAM2Q15035 370 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 C5orf46Q6UWT4 87 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 ZNF771Q7L3S4 317 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 RRM2BQ7LG56 351 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 CCDC36Q8IYA8 594 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 OFCC1Q8IZS5 231 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 OR51F2Q8NH61 342 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 TAAR8Q969N4 342 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 EPYCQ99645 322 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 MS4A5Q9H3V2 200 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 G6PC2Q9NQR9 355 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 ZNF224Q9NZL3 707 aa14.09□□□□□ -0.15
SHKBP1-215ENST00000597649 M0R082 166 aa14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 M0R3G1 203 aa14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 PPIHO43447 177 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 TRAF3IP2O43734 574 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 RP2O75695 350 aa14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 CD79AP11912 226 aa14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 GLRXP35754 106 aa14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 KPNB1Q14974 876 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 FGD3Q5JSP0 725 aa14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 SHQ1Q6PI26 577 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 NHLRC1Q6VVB1 395 aa14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 PIWIL3Q7Z3Z3 882 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 TSPYL5Q86VY4 417 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 C20orf196Q8IYI0 205 aa14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 C10orf53Q8N6V4 93 aa14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 ZNF417Q8TAU3 575 aa14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 ZNF587Q96SQ5 575 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 NMNAT1Q9HAN9 279 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 ESM1Q9NQ30 184 aa14.08□□□□□ -0.16
SHKBP1-215ENST00000597649 ANKRD65E5RJM6 399 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 MS4A18H0YCH9 400 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 TRIM77I1YAP6 450 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 GNGT2O14610 69 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 FFAR1O14842 300 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 FKBP6O75344 327 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 GADD45GO95257 159 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 LYPD3O95274 346 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 HPRP00739 348 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 THY1P04216 161 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 NAT2P11245 290 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 HLA-DOBP13765 273 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 GTF2E2P29084 291 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 RBM34P42696 430 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 ACTR3P61158 418 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 C1DQ13901 141 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 GSG1Q2KHT4 349 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 MS4A18Q3C1V0 323 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 AWAT1Q58HT5 328 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 CARD17Q5XLA6 110 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 LINC00114Q6XXX2 140 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 TSEN54Q7Z6J9 526 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 NKAIN4Q8IVV8 208 aa14.07□□□□□ -0.16
SHKBP1-215ENST00000597649 PIK3C3Q8NEB9 887 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms