RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 RPS4Y1P22090 263 aaKnown RBP12.47□□□□□ -0.41
NPHP4-207ENST00000470763 DDX6P26196 483 aaKnown RBP eCLIP12.47□□□□□ -0.41
NPHP4-207ENST00000470763 CCR2P41597 374 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 ACTBP60709 375 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 ACTG1P63261 375 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 PPP1R1AQ13522 171 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 EXOSC7Q15024 291 aaKnown RBP12.47□□□□□ -0.41
NPHP4-207ENST00000470763 LEG1Q6P5S2 330 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 CACUL1Q86Y37 369 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 FAM219AQ8IW50 185 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 PLPP7Q8NBV4 271 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 OR4E2Q8NGC2 313 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 ZCCHC10Q8TBK6 192 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 PHOSPHO2Q8TCD6 241 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 RNF141Q8WVD5 230 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 DCUN1D4Q92564 292 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 FAM3DQ96BQ1 224 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 INTS12Q96CB8 462 aaKnown RBP12.47□□□□□ -0.41
NPHP4-207ENST00000470763 SEH1LQ96EE3 360 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 SLC6A7Q99884 636 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 RSRP1Q9BUV0 290 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 LAT2Q9GZY6 243 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 SPHK2Q9NRA0 654 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 TMEM74BQ9NUR3 256 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 HCFC1R1Q9NWW0 138 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 VSIG4Q9Y279 399 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 ENTPD2Q9Y5L3 495 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 WNT6Q9Y6F9 365 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 C13orf42A0A1B0GVH6 325 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 UBE2CO00762 179 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 HOXA2O43364 376 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 CA3P07451 260 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 TPT1P13693 172 aaKnown RBP12.47□□□□□ -0.41
NPHP4-207ENST00000470763 EMDP50402 254 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 SKP1P63208 163 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 ZNF684Q5T5D7 378 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 TMPPEQ6ZT21 453 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 SPRED2Q7Z698 418 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 BAP18Q8IXM2 172 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 OR13C8Q8NGS7 320 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 RCC2Q9P258 522 aaKnown RBP12.47□□□□□ -0.41
NPHP4-207ENST00000470763 MYO7AQ13402 2215 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 ELOA3DA6NLF2 546 aaPredicted RBP12.46□□□□□ -0.41
NPHP4-207ENST00000470763 SRPX2O60687 465 aaPredicted RBP12.46□□□□□ -0.41
NPHP4-207ENST00000470763 IGHV2-70P01814 119 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 ZNF888P0CJ79 500 aaPredicted RBP12.46□□□□□ -0.41
NPHP4-207ENST00000470763 FOSL2P15408 326 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 VAMP1P23763 118 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 ELOA3BQ3SY89 546 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 TMEFF1Q8IYR6 380 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 CRIPAKQ8N1N5 446 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 ELOA3Q8NG57 546 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 TSEN15Q8WW01 171 aaKnown RBP12.46□□□□□ -0.41
NPHP4-207ENST00000470763 EDAQ92838 391 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 SLC25A21Q9BQT8 299 aaPredicted RBP12.46□□□□□ -0.41
NPHP4-207ENST00000470763 CST11Q9H112 138 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 RHOFQ9HBH0 211 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 OR2S2Q9NQN1 319 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 MMP26Q9NRE1 261 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 CSAG2Q9Y5P2 127 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 TRBV5-5A0A0J9YX44 114 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 ZNF860A6NHJ4 632 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 LRRC72A6NJI9 287 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 CDC40O60508 579 aaKnown RBP eCLIP12.46□□□□□ -0.41
NPHP4-207ENST00000470763 HTR3BO95264 441 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 CD74P04233 296 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 SFTA3P0C7M3 94 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 CPT2P23786 658 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 CCKBRP32239 447 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 PJVKQ0ZLH3 352 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 TCEA2Q15560 299 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 LINC01590Q5TEZ4 76 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.46□□□□□ -0.41
NPHP4-207ENST00000470763 LILRB2Q8N423 598 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 OR4K17Q8NGC6 315 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 ARL5BQ96KC2 179 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 GTF2A1LQ9UNN4 478 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 KCNK6Q9Y257 313 aa12.46□□□□□ -0.41
NPHP4-207ENST00000470763 PMS2P1A4D2B8 440 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 C5orf51A6NDU8 294 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 H7C1C5 153 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 LDB3O75112 727 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 CYB5AP00167 134 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 LRG1P02750 347 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 S100PP25815 95 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 GABRA3P34903 492 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 RAB28P51157 221 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 LCN6P62502 163 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 MST1LQ2TV78 715 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 C9orf152Q5JTZ5 239 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 LPCAT3Q6P1A2 487 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 MAFAQ8NHW3 353 aaPredicted RBP12.46□□□□□ -0.42
NPHP4-207ENST00000470763 FOXRED1Q96CU9 486 aaPredicted RBP12.46□□□□□ -0.42
NPHP4-207ENST00000470763 PAPOLGQ9BWT3 736 aaKnown RBP12.46□□□□□ -0.42
NPHP4-207ENST00000470763 SRA1Q9HD15 236 aaKnown RBP12.46□□□□□ -0.42
NPHP4-207ENST00000470763 ZDHHC4Q9NPG8 344 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 DZANK1Q9NVP4 752 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 DTX4Q9Y2E6 619 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 PCDHGA1Q9Y5H4 931 aa12.46□□□□□ -0.42
NPHP4-207ENST00000470763 TACSTD2P09758 323 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms