RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 CTXN1P60606 82 aa17.78■□□□□ 0.44
SDC1-205ENST00000447124 RPL27P61353 136 aaKnown RBP17.78■□□□□ 0.44
SDC1-205ENST00000447124 PRKCDQ05655 676 aa17.78■□□□□ 0.44
SDC1-205ENST00000447124 TOP3AQ13472 1001 aaPredicted RBP17.78■□□□□ 0.44
SDC1-205ENST00000447124 TRAM2Q15035 370 aa17.78■□□□□ 0.44
SDC1-205ENST00000447124 ALKBH6Q3KRA9 238 aa17.78■□□□□ 0.44
SDC1-205ENST00000447124 HSP90B2PQ58FF3 399 aa17.78■□□□□ 0.44
SDC1-205ENST00000447124 RGS7BPQ6MZT1 257 aaPredicted RBP17.78■□□□□ 0.44
SDC1-205ENST00000447124 HDDC2Q7Z4H3 204 aa17.78■□□□□ 0.44
SDC1-205ENST00000447124 RBM15BQ8NDT2 890 aaKnown RBP17.78■□□□□ 0.44
SDC1-205ENST00000447124 OR51A7Q8NH64 312 aa17.78■□□□□ 0.44
SDC1-205ENST00000447124 SHARPINQ9H0F6 387 aa17.78■□□□□ 0.44
SDC1-205ENST00000447124 EFCAB1Q9HAE3 211 aa17.78■□□□□ 0.44
SDC1-205ENST00000447124 CDH20Q9HBT6 801 aa17.78■□□□□ 0.44
SDC1-205ENST00000447124 MED4Q9NPJ6 270 aa17.78■□□□□ 0.44
SDC1-205ENST00000447124 TRAV27A0A087WT01 109 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 A0A087WUU8 490 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 SLC22A23A1A5C7 686 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 ZNF682O95780 498 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 IFNW1P05000 195 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 ZNF250P15622 560 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 APEX1P27695 318 aaKnown RBP17.77■□□□□ 0.44
SDC1-205ENST00000447124 UCP2P55851 309 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 SGCAQ16586 387 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 IFI44LQ53G44 452 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 PABPC1L2AQ5JQF8 200 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 FAM120AOSQ5T036 256 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 HACD2Q6Y1H2 254 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 YIPF5Q969M3 257 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 SNX18Q96RF0 628 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 ALG12Q9BV10 488 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 SMURF2Q9HAU4 748 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 TAAR3PQ9P1P4 343 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 STX18Q9P2W9 335 aaKnown RBP17.77■□□□□ 0.44
SDC1-205ENST00000447124 LPAR3Q9UBY5 353 aa17.77■□□□□ 0.44
SDC1-205ENST00000447124 IGLV3-9A0A075B6K5 115 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 NCR1O76036 304 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 SNAP29O95721 258 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 SERPINA1P01009 418 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 IGHMP01871 453 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 NCK1P16333 377 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 ZNF26P17031 533 aaPredicted RBP17.76■□□□□ 0.43
SDC1-205ENST00000447124 ZNF32P17041 273 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 IFNA8P32881 189 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 CHN2P52757 468 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 PLP2Q04941 152 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 CD47Q08722 323 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 TAF11Q15544 211 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 OR1J2Q8NGS2 313 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 ZNF519Q8TB69 540 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 GEMIN6Q8WXD5 167 aaKnown RBP17.76■□□□□ 0.43
SDC1-205ENST00000447124 ACOT11Q8WXI4 607 aaPredicted RBP17.76■□□□□ 0.43
SDC1-205ENST00000447124 HSH2DQ96JZ2 352 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 RBP7Q96R05 134 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 ELAC2Q9BQ52 826 aaKnown RBP17.76■□□□□ 0.43
SDC1-205ENST00000447124 MYLK2Q9H1R3 596 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 C1orf198Q9H425 327 aa17.76■□□□□ 0.43
SDC1-205ENST00000447124 LOC100509620A0A075B734 347 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 IQCMA0A1B0GVH7 501 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 A0A1W2PPW3 197 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 RNF212BA8MTL3 300 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 CDC42EP2O14613 210 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 GSTA4O15217 222 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 PTHP01270 115 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 SCG5P05408 212 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 LCKP06239 509 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 SAGP10523 405 aaPredicted RBP17.75■□□□□ 0.43
SDC1-205ENST00000447124 MAGEB1P43366 347 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 PSG4Q00888 419 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 TBC1D28Q2M2D7 210 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 FAM27BQ5VT28 67 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 FKBP9P1Q75LS8 142 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 RNF113BQ8IZP6 322 aaKnown RBP17.75■□□□□ 0.43
SDC1-205ENST00000447124 OR13C2Q8NGS9 318 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 AKR7LQ8NHP1 331 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 SYNPRQ8TBG9 265 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 RDH5Q92781 318 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 HPS1Q92902 700 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 C1orf159Q96HA4 380 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 POM121L2Q96KW2 1035 aa17.75■□□□□ 0.43
SDC1-205ENST00000447124 EFCAB9A8MZ26 197 aa17.74■□□□□ 0.43
SDC1-205ENST00000447124 WNT9BO14905 357 aa17.74■□□□□ 0.43
SDC1-205ENST00000447124 RAD52P43351 418 aa17.74■□□□□ 0.43
SDC1-205ENST00000447124 PSME3P61289 254 aa17.74■□□□□ 0.43
SDC1-205ENST00000447124 HSF2Q03933 536 aa17.74■□□□□ 0.43
SDC1-205ENST00000447124 THEM4Q5T1C6 240 aa17.74■□□□□ 0.43
SDC1-205ENST00000447124 FOXL2NBQ6ZUU3 175 aa17.74■□□□□ 0.43
SDC1-205ENST00000447124 MBOAT2Q6ZWT7 520 aa17.74■□□□□ 0.43
SDC1-205ENST00000447124 OAFQ86UD1 273 aa17.74■□□□□ 0.43
SDC1-205ENST00000447124 PHC2Q8IXK0 858 aa17.74■□□□□ 0.43
SDC1-205ENST00000447124 C11orf40Q8WZ69 217 aa17.74■□□□□ 0.43
SDC1-205ENST00000447124 LRMDAQ9H2I8 198 aa17.74■□□□□ 0.43
SDC1-205ENST00000447124 KCNN2Q9H2S1 579 aa17.74■□□□□ 0.43
SDC1-205ENST00000447124 ABCD2Q9UBJ2 740 aa17.74■□□□□ 0.43
SDC1-205ENST00000447124 C17orf100A8MU93 164 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 PHF1O43189 567 aaPredicted RBP17.73■□□□□ 0.43
SDC1-205ENST00000447124 CCNOP22674 350 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 STOMP27105 288 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 LAP3P28838 519 aa17.73■□□□□ 0.43
SDC1-205ENST00000447124 APLNRP35414 380 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms