RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 COQ5Q5HYK3 327 aa15.79■□□□□ 0.12
SREBF1-206ENST00000423161 PABPC1L2AQ5JQF8 200 aa15.79■□□□□ 0.12
SREBF1-206ENST00000423161 ARMC4Q5T2S8 1044 aa15.79■□□□□ 0.12
SREBF1-206ENST00000423161 LIPHQ8WWY8 451 aa15.79■□□□□ 0.12
SREBF1-206ENST00000423161 KCNN2Q9H2S1 579 aa15.79■□□□□ 0.12
SREBF1-206ENST00000423161 CCNB1IP1Q9NPC3 277 aa15.79■□□□□ 0.12
SREBF1-206ENST00000423161 MRGBPQ9NV56 204 aa15.79■□□□□ 0.12
SREBF1-206ENST00000423161 MED31Q9Y3C7 131 aa15.79■□□□□ 0.12
SREBF1-206ENST00000423161 ANK2Q01484 3957 aa15.79■□□□□ 0.12
SREBF1-206ENST00000423161 BBIP1A8MTZ0 92 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 PIP5K1CO60331 668 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 CDC14BO60729 498 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 NPPAP01160 153 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 TSPAN19P0C672 248 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 GLO1Q04760 184 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 FMODQ06828 376 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 KLF10Q13118 480 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 LAPTM4AQ15012 233 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 LRRC23Q53EV4 343 aaPredicted RBP15.78■□□□□ 0.12
SREBF1-206ENST00000423161 OR1J1Q8NGS3 322 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 OR51F2Q8NH61 342 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 C10orf82Q8WW14 230 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 HDAC2Q92769 488 aaKnown RBP15.78■□□□□ 0.12
SREBF1-206ENST00000423161 ZNF583Q96ND8 569 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 METTL17Q9H7H0 456 aaPredicted RBP15.78■□□□□ 0.12
SREBF1-206ENST00000423161 SIAEQ9HAT2 523 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 SMURF2Q9HAU4 748 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 ARGLU1Q9NWB6 273 aaPredicted RBP15.78■□□□□ 0.12
SREBF1-206ENST00000423161 METRNQ9UJH8 293 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 GRIP1Q9Y3R0 1128 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 UGT2A1Q9Y4X1 527 aa15.78■□□□□ 0.12
SREBF1-206ENST00000423161 NPIPB13A6NJU9 1138 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 NPIPB4C9JG80 1138 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 TROVE2P10155 538 aaKnown RBP eCLIP15.77■□□□□ 0.12
SREBF1-206ENST00000423161 THRBP10828 461 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 NR2C1P13056 603 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 ZNF32P17041 273 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 DRD4P21917 467 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 CCNOP22674 350 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 LMO4P61968 165 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 TOP3AQ13472 1001 aaPredicted RBP15.77■□□□□ 0.12
SREBF1-206ENST00000423161 MAPRE2Q15555 327 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 MOGQ16653 247 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 CYBRD1Q53TN4 286 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 CPEB3Q8NE35 698 aaKnown RBP15.77■□□□□ 0.12
SREBF1-206ENST00000423161 NSMAFQ92636 917 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 GTF3AQ92664 365 aaKnown RBP15.77■□□□□ 0.12
SREBF1-206ENST00000423161 NABP1Q96AH0 204 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 NMD3Q96D46 503 aaKnown RBP15.77■□□□□ 0.12
SREBF1-206ENST00000423161 TPD52L3Q96J77 140 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 LRRC37BQ96QE4 947 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 TXNIPQ9H3M7 391 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 OCEL1Q9H607 264 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 NKIRAS2Q9NYR9 191 aa15.77■□□□□ 0.12
SREBF1-206ENST00000423161 NBEAL1Q6ZS30 2694 aa15.77■□□□□ 0.11
SREBF1-206ENST00000423161 IGKV1D-43A0A0B4J1Z2 117 aa15.76■□□□□ 0.11
SREBF1-206ENST00000423161 FAM220BPB1ANY3 271 aa15.76■□□□□ 0.11
SREBF1-206ENST00000423161 TPD52L2O43399 206 aaKnown RBP15.76■□□□□ 0.11
SREBF1-206ENST00000423161 MT-ND5P03915 603 aa15.76■□□□□ 0.11
SREBF1-206ENST00000423161 STOMP27105 288 aa15.76■□□□□ 0.11
SREBF1-206ENST00000423161 ARFIP2P53365 341 aa15.76■□□□□ 0.11
SREBF1-206ENST00000423161 TEKQ02763 1124 aa15.76■□□□□ 0.11
SREBF1-206ENST00000423161 MVKQ03426 396 aa15.76■□□□□ 0.11
SREBF1-206ENST00000423161 SF3A3Q12874 501 aaKnown RBP eCLIP15.76■□□□□ 0.116e-7■■■■□ 23.5
SREBF1-206ENST00000423161 SGCAQ16586 387 aa15.76■□□□□ 0.11
SREBF1-206ENST00000423161 ALG10Q5BKT4 473 aa15.76■□□□□ 0.11
SREBF1-206ENST00000423161 AVPI1Q5T686 147 aa15.76■□□□□ 0.11
SREBF1-206ENST00000423161 SHQ1Q6PI26 577 aaKnown RBP15.76■□□□□ 0.11
SREBF1-206ENST00000423161 PRRC1Q96M27 445 aa15.76■□□□□ 0.11
SREBF1-206ENST00000423161 DECR2Q9NUI1 292 aa15.76■□□□□ 0.11
SREBF1-206ENST00000423161 GID8Q9NWU2 228 aa15.76■□□□□ 0.11
SREBF1-206ENST00000423161 HIF3AQ9Y2N7 669 aa15.76■□□□□ 0.11
SREBF1-206ENST00000423161 IGHV1-69-2A0A0G2JMI3 117 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 GMNCA6NCL1 334 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 IGHV3-13P01766 116 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 IFI30P13284 250 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 KDELR2P33947 212 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 CRYBB2P43320 205 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 ERVK-25P63136 954 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 ST3GAL3Q11203 375 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 TAF11Q15544 211 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 SPATA46Q5T0L3 261 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 SLC25A47Q6Q0C1 308 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 USP51Q70EK9 711 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 ZNF101Q8IZC7 436 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 PCYOX1LQ8NBM8 494 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 OR2T12Q8NG77 320 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 AKR7LQ8NHP1 331 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 BPIFA2Q96DR5 249 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 POM121L2Q96KW2 1035 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 ALG12Q9BV10 488 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 ZNF665Q9H7R5 613 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 SAP30LQ9HAJ7 183 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 SAR1AQ9NR31 198 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 FGFR1OP2Q9NVK5 253 aa15.75■□□□□ 0.11
SREBF1-206ENST00000423161 EIF3KQ9UBQ5 218 aaKnown RBP15.75■□□□□ 0.11
SREBF1-206ENST00000423161 LOC100509620A0A075B734 347 aa15.74■□□□□ 0.11
SREBF1-206ENST00000423161 TRAV20A0A0B4J274 112 aa15.74■□□□□ 0.11
SREBF1-206ENST00000423161 LOC100653049A0A140TA62 436 aa15.74■□□□□ 0.11
SREBF1-206ENST00000423161 C5orf49A4QMS7 147 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms