RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 CR1P17927 2039 aa17.54■□□□□ 0.4
GTF3A-202ENST00000419181 NDUFB2O95178 105 aa17.54■□□□□ 0.4
GTF3A-202ENST00000419181 LY6G6DO95868 133 aa17.54■□□□□ 0.4
GTF3A-202ENST00000419181 HEXAP06865 529 aa17.54■□□□□ 0.4
GTF3A-202ENST00000419181 MMP7P09237 267 aaPredicted RBP17.54■□□□□ 0.4
GTF3A-202ENST00000419181 EFNA4P52798 201 aa17.54■□□□□ 0.4
GTF3A-202ENST00000419181 FXYD6P3P58550 94 aa17.54■□□□□ 0.4
GTF3A-202ENST00000419181 TMEM53Q6P2H8 277 aa17.54■□□□□ 0.4
GTF3A-202ENST00000419181 ZDHHC21Q8IVQ6 265 aa17.54■□□□□ 0.4
GTF3A-202ENST00000419181 LRRC18Q8N456 261 aa17.54■□□□□ 0.4
GTF3A-202ENST00000419181 Q96M85 177 aa17.54■□□□□ 0.4
GTF3A-202ENST00000419181 GPX7Q96SL4 187 aaPredicted RBP17.54■□□□□ 0.4
GTF3A-202ENST00000419181 GPA33Q99795 319 aa17.54■□□□□ 0.4
GTF3A-202ENST00000419181 MUC13Q9H3R2 512 aa17.54■□□□□ 0.4
GTF3A-202ENST00000419181 RNF121Q9H920 327 aa17.54■□□□□ 0.4
GTF3A-202ENST00000419181 GRHPRQ9UBQ7 328 aa17.54■□□□□ 0.4
GTF3A-202ENST00000419181 AURKCQ9UQB9 309 aa17.54■□□□□ 0.4
GTF3A-202ENST00000419181 VSTM5A8MXK1 200 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 RNF223E7ERA6 249 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 PPOXP50336 477 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 MESTQ5EB52 335 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 MTX3Q5HYI7 312 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 FAM27BQ5VT28 67 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 LCN8Q6JVE9 175 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 THSD4Q6ZMP0 1018 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 FOXL2NBQ6ZUU3 175 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 ZER1Q7Z7L7 766 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 SLC30A7Q8NEW0 376 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 ZNF570Q96NI8 536 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 SORCS2Q96PQ0 1159 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 REG4Q9BYZ8 158 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 C1orf21Q9H246 121 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 C1orf198Q9H425 327 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 NRIP3Q9NQ35 241 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 SPEF1Q9Y4P9 236 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 RTTNQ86VV8 2226 aa17.53■□□□□ 0.4
GTF3A-202ENST00000419181 TCRBV5S2A0A599 114 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 TMEM129A0AVI4 362 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 UNC119BA6NIH7 251 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 H7C1C5 153 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 GPRIN2O60269 458 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 F12P00748 615 aaPredicted RBP17.52■□□□□ 0.4
GTF3A-202ENST00000419181 HOXB4P17483 251 aaPredicted RBP17.52■□□□□ 0.4
GTF3A-202ENST00000419181 RRM2P31350 389 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 GLRXP35754 106 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 LCN6P62502 163 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 GALK2Q01415 458 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 TRIM25Q14258 630 aaKnown RBP17.52■□□□□ 0.4
GTF3A-202ENST00000419181 MSMPQ1L6U9 139 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 CLEC2AQ6UVW9 174 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 SVOPLQ8N434 492 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 ZNF525Q8N782 197 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 OR10H5Q8NGA6 315 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 BCAS4Q8TDM0 211 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 DOK1Q99704 481 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 TAS2R1Q9NYW7 299 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 SLC7A8Q9UHI5 535 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 FBXO9Q9UK97 447 aaPredicted RBP17.52■□□□□ 0.4
GTF3A-202ENST00000419181 PRPF19Q9UMS4 504 aaKnown RBP17.52■□□□□ 0.4
GTF3A-202ENST00000419181 CMAHPQ9Y471 501 aa17.52■□□□□ 0.4
GTF3A-202ENST00000419181 FN1P02751 2386 aaKnown RBP17.51■□□□□ 0.39
GTF3A-202ENST00000419181 NAV3Q8IVL0 2385 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 IGHV4-30-2A0A087WSY4 118 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 TEX13CA0A0J9YWL9 993 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 SLC22A23A1A5C7 686 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 XKRYO14609 159 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 AHCYL1O43865 530 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 LY6HO94772 140 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 SNAP29O95721 258 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 SDHAP31040 664 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 MAGEA2P43356 314 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 DSCR9P59020 149 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 MS4A2Q01362 244 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 PLP2Q04941 152 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 SGCAQ16586 387 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 GPR139Q6DWJ6 353 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 TRPM8Q7Z2W7 1104 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 DHFR2Q86XF0 187 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 PAQR4Q8N4S7 273 aaPredicted RBP17.51■□□□□ 0.39
GTF3A-202ENST00000419181 MRPL24Q96A35 216 aaKnown RBP17.51■□□□□ 0.39
GTF3A-202ENST00000419181 RASD2Q96D21 266 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 RHNO1Q9BSD3 238 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 KCNN2Q9H2S1 579 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 IL20RAQ9UHF4 553 aa17.51■□□□□ 0.39
GTF3A-202ENST00000419181 PRSS37A4D1T9 235 aa17.5■□□□□ 0.39
GTF3A-202ENST00000419181 OR10H3O60404 316 aa17.5■□□□□ 0.39
GTF3A-202ENST00000419181 PTHP01270 115 aa17.5■□□□□ 0.39
GTF3A-202ENST00000419181 CCL2P13500 99 aa17.5■□□□□ 0.39
GTF3A-202ENST00000419181 ZNF32P17041 273 aa17.5■□□□□ 0.39
GTF3A-202ENST00000419181 FPR3P25089 353 aa17.5■□□□□ 0.39
GTF3A-202ENST00000419181 RPS23P62266 143 aaKnown RBP17.5■□□□□ 0.39
GTF3A-202ENST00000419181 KRR1Q13601 381 aaKnown RBP17.5■□□□□ 0.39
GTF3A-202ENST00000419181 PABPC1L2AQ5JQF8 200 aa17.5■□□□□ 0.39
GTF3A-202ENST00000419181 SMARCD3Q6STE5 483 aa17.5■□□□□ 0.39
GTF3A-202ENST00000419181 DPY19L2P2Q6ZN68 376 aa17.5■□□□□ 0.39
GTF3A-202ENST00000419181 MAPK1IP1LQ8NDC0 245 aa17.5■□□□□ 0.39
GTF3A-202ENST00000419181 CPEB3Q8NE35 698 aaKnown RBP17.5■□□□□ 0.39
GTF3A-202ENST00000419181 VRK1Q99986 396 aaPredicted RBP17.5■□□□□ 0.39
GTF3A-202ENST00000419181 MRPL37Q9BZE1 423 aaKnown RBP17.5■□□□□ 0.39
GTF3A-202ENST00000419181 CCNB1IP1Q9NPC3 277 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms