RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 CCR9P51686 369 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 BLVRAP53004 296 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 SLC22A10Q63ZE4 541 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 PMS2CLQ68D20 193 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 GLB1L2Q8IW92 636 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 OR11H7Q8NGC8 314 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 ZFAND1Q8TCF1 268 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 RAB40AQ8WXH6 277 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 ASB10Q8WXI3 467 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 PHF21AQ96BD5 680 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 BEX1Q9HBH7 125 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 MED29Q9NX70 200 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 KLHL9Q9P2J3 617 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 RALGAPA1Q6GYQ0 2036 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 KIF26BQ2KJY2 2108 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 FAM47E-STBD1D6RA91 191 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 EFNA2O43921 213 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 KRT33AO76009 404 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 SYPP08247 313 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 APOBEC1P41238 236 aaKnown RBP16.81■□□□□ 0.28
USP49-202ENST00000373010 ROM1Q03395 351 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 GLO1Q04760 184 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 TEX30Q5JUR7 227 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 PHF19Q5T6S3 580 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 H1FNTQ75WM6 255 aaPredicted RBP16.81■□□□□ 0.28
USP49-202ENST00000373010 BTN2A1Q7KYR7 527 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 BEST4Q8NFU0 473 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 MFSD8Q8NHS3 518 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 NKX3-1Q99801 234 aaPredicted RBP16.81■□□□□ 0.28
USP49-202ENST00000373010 OR51J1Q9H342 316 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 HRASLSQ9HDD0 168 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 NKIRAS2Q9NYR9 191 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 COPZ2Q9P299 210 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 RABL2AQ9UBK7 228 aaPredicted RBP16.81■□□□□ 0.28
USP49-202ENST00000373010 PILRBQ9UKJ0 227 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 RABL2BQ9UNT1 228 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 LRP12Q9Y561 859 aa16.81■□□□□ 0.28
USP49-202ENST00000373010 TNRC6BQ9UPQ9 1833 aaKnown RBP16.81■□□□□ 0.28
USP49-202ENST00000373010 IGKV1D-43A0A0B4J1Z2 117 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 NPIPA5E9PKD4 350 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 DOK2O60496 412 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 TMEM127O75204 238 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 OR2J2O76002 312 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 FOSL2P15408 326 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 CSRP1P21291 193 aaKnown RBP16.8■□□□□ 0.28
USP49-202ENST00000373010 CRABP1P29762 137 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 POU3F1Q03052 451 aaPredicted RBP16.8■□□□□ 0.28
USP49-202ENST00000373010 INPP5JQ15735 1006 aaPredicted RBP16.8■□□□□ 0.28
USP49-202ENST00000373010 ZNF227Q86WZ6 799 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 PPP1R3BQ86XI6 285 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 OR10G3Q8NGC4 313 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 FCAMRQ8WWV6 532 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 MRI1Q9BV20 369 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 PPP4R1LQ9P1A2 415 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 NPIPA1Q9UND3 350 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 ETV7Q9Y603 341 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 AKR7A2O43488 359 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 OPN1LWP04000 364 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 STOMP27105 288 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 SUMO3P55854 103 aaPredicted RBP16.8■□□□□ 0.28
USP49-202ENST00000373010 TAS2R20P59543 309 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 TLE3Q04726 772 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 GSG1Q2KHT4 349 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 KCTD18Q6PI47 426 aaPredicted RBP16.8■□□□□ 0.28
USP49-202ENST00000373010 MAFAQ8NHW3 353 aaPredicted RBP16.8■□□□□ 0.28
USP49-202ENST00000373010 MS4A3Q96HJ5 214 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 KCNK15Q9H427 330 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 STEAP1Q9UHE8 339 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 FLVCR2Q9UPI3 526 aa16.8■□□□□ 0.28
USP49-202ENST00000373010 KHDRBS3O75525 346 aaKnown RBP16.79■□□□□ 0.28
USP49-202ENST00000373010 PDGFBP01127 241 aaPredicted RBP16.79■□□□□ 0.28
USP49-202ENST00000373010 RIDAP52758 137 aaKnown RBP16.79■□□□□ 0.28
USP49-202ENST00000373010 SNRPD2P62316 118 aaKnown RBP16.79■□□□□ 0.28
USP49-202ENST00000373010 C19orf57Q0VDD7 668 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 ZP4Q12836 540 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 TNK1Q13470 666 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 ASPHD2Q6ICH7 369 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 LYPD8Q6UX82 237 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 NDUFAF7Q7L592 441 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 LINC00346Q8IVM7 164 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 OR51D1Q8NGF3 324 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 OR5L2Q8NGL0 311 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 OR6S1Q8NH40 331 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 GIMAP1Q8WWP7 306 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 DACT3Q96B18 629 aaPredicted RBP16.79■□□□□ 0.28
USP49-202ENST00000373010 DDIT4LQ96D03 193 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 C5orf34Q96MH7 638 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 GAREM1Q9H706 876 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 CHST11Q9NPF2 352 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 MYOTQ9UBF9 498 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 ZNF222Q9UK12 451 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 FBXL3Q9UKT7 428 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 FABP7O15540 132 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 SULT1B1O43704 296 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 ZFAND5O76080 213 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 CFIP05156 583 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 PTGDSP41222 190 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 EFNB2P52799 333 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 HSF1Q00613 529 aa16.79■□□□□ 0.28
USP49-202ENST00000373010 ST3GAL2Q16842 350 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms