RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 VASPP50552 380 aaPredicted RBP14.74□□□□□ -0.05
NPHP3-201ENST00000337331 SPOCK1Q08629 439 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 LCN10Q6JVE6 187 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 PXKQ7Z7A4 578 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 GPR137CQ8N3F9 429 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 GOT1L1Q8NHS2 421 aaPredicted RBP14.74□□□□□ -0.05
NPHP3-201ENST00000337331 GDF15Q99988 308 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 NAA11Q9BSU3 229 aaPredicted RBP14.74□□□□□ -0.05
NPHP3-201ENST00000337331 ELOVL3Q9HB03 270 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 FAM86C1Q9NVL1 165 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 CABIN1Q9Y6J0 2220 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 A0A0A6YYH2 397 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 A6NJ64 397 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 M0QYG6 137 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 ZNF217O75362 1048 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 DIRAS3O95661 229 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 OR1D4P47884 311 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 SIRPAP78324 504 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 RNF151Q2KHN1 245 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 WBP2NLQ6ICG8 309 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 ZNF705AQ6ZN79 300 aaPredicted RBP14.74□□□□□ -0.05
NPHP3-201ENST00000337331 SLC35F3Q8IY50 421 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 MMP21Q8N119 569 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 CDC6Q99741 560 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 PDCD1LG2Q9BQ51 273 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 NOX4Q9NPH5 578 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 ZNF281Q9Y2X9 895 aa14.74□□□□□ -0.05
NPHP3-201ENST00000337331 MPTX1A8MV57 137 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 KDM4EB2RXH2 506 aaPredicted RBP14.73□□□□□ -0.05
NPHP3-201ENST00000337331 SYNGR4O95473 234 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 LAP3P28838 519 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 NPBWR1P48145 328 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 LIM2P55344 173 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 ZNF660Q6AZW8 331 aaPredicted RBP14.73□□□□□ -0.05
NPHP3-201ENST00000337331 ETFBKMTQ8IXQ9 262 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 BPIFB2Q8N4F0 458 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 TMEM99Q8N816 258 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 DDIT4LQ96D03 193 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 OR5B2Q96R09 309 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 TAAR2Q9P1P5 351 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 A0A1B0GWA3 101 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 HMSDA8MTL9 139 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 TERTO14746 1132 aaKnown RBP14.73□□□□□ -0.05
NPHP3-201ENST00000337331 RAB40ALP0C0E4 278 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 EMP2P54851 167 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 LTBQ06643 244 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 C4orf17Q53FE4 359 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 SLC48A1Q6P1K1 146 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 ARL14Q8N4G2 192 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 SPICQ8N5J4 248 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 RAB40AQ8WXH6 277 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 SLC25A19Q9HC21 320 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 KIAA1551Q9HCM1 1747 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 CHD5Q8TDI0 1954 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 LAMB1P07942 1786 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 TMEM269A0A1B0GVZ9 245 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 TSPAN11A1L157 253 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 A6NLC8 198 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 H7C1C5 153 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 GAPDHSO14556 408 aaPredicted RBP14.73□□□□□ -0.05
NPHP3-201ENST00000337331 MT-ND4LP03901 98 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 OR13C7P0DN81 318 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 LCN6P62502 163 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 CYCSP99999 105 aaKnown RBP14.73□□□□□ -0.05
NPHP3-201ENST00000337331 MAT1AQ00266 395 aaKnown RBP14.73□□□□□ -0.05
NPHP3-201ENST00000337331 MRPL58Q14197 206 aaKnown RBP14.73□□□□□ -0.05
NPHP3-201ENST00000337331 TMEM244Q5VVB8 128 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 CHRDL2Q6WN34 429 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 SLC35D2Q76EJ3 337 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 BAP18Q8IXM2 172 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 SNIP1Q8TAD8 396 aaKnown RBP14.73□□□□□ -0.05
NPHP3-201ENST00000337331 SCGB1C1Q8TD33 95 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 NINJ1Q92982 152 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 MYADMQ96S97 322 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 NMNAT3Q96T66 252 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 POFUT1Q9H488 388 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 OPN4Q9UHM6 478 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 TRBV5-3A0A0A0MS03 114 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 TMEM235A6NFC5 223 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 YY2O15391 372 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 SFTA3P0C7M3 94 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 ZSCAN4Q8NAM6 433 aaPredicted RBP14.73□□□□□ -0.05
NPHP3-201ENST00000337331 SENP5Q96HI0 755 aaPredicted RBP14.73□□□□□ -0.05
NPHP3-201ENST00000337331 LYSMD1Q96S90 227 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 ALG12Q9BV10 488 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 ZBP1Q9H171 429 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 FBXL4Q9UKA2 621 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 RHBDD3Q9Y3P4 386 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 PLEKHM1Q9Y4G2 1056 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 KPTNQ9Y664 436 aa14.73□□□□□ -0.05
NPHP3-201ENST00000337331 OR2C1O95371 312 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 ATF1P18846 271 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 HTR1FP30939 366 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 FOXK2Q01167 660 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 ARL6IP1Q15041 203 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 ZNF385BQ569K4 471 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 PRICKLE2Q7Z3G6 844 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 GDF7Q7Z4P5 450 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 SUMF2Q8NBJ7 301 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 PPP1R1CQ8WVI7 109 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms