RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Zmat3O54836 290 aaKnown RBP14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 NfyaP23708 346 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Evx2P49749 475 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Acod1P54987 488 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Col10a1Q05306 680 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Phox2aQ62066 280 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Cramp1Q6PG95 1285 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr1065Q7TR70 313 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Fam221aQ8C790 301 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Dcun1d4Q8CCA0 292 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr768Q8VGC4 312 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Chrm5Q920H4 532 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 WacQ924H7 646 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 AspnQ99MQ4 373 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Ntn4Q9JI33 628 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr1234A2AVK5 314 aa14.33□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Hoxb9P20615 250 aa14.33□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Cd82P40237 266 aa14.33□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gsc2P56916 198 aa14.33□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Btg1P62325 171 aa14.33□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Rack1P68040 317 aaKnown RBP14.33□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Isg20l2Q3U1G5 368 aaKnown RBP14.33□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Synpo2lQ8BWB1 975 aa14.33□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Noxa1Q8CJ00 444 aa14.33□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 BanpQ8VBU8 548 aa14.33□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Coq5Q9CXI0 327 aa14.33□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Armc10Q9D0L7 306 aa14.33□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Prl3c1Q9QUN5 212 aa14.33□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Mfap5Q9QZJ6 164 aa14.33□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Adamts5Q9R001 930 aa14.33□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Trav1A0A075B5Z4 110 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm14418A2ARR6 358 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm14322A2AW66 358 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Rd3lB2RV38 197 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Zfp616J3QN14 987 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Kcnk3O35111 409 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Cops3O88543 423 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Slc6a12P31651 614 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Apoc1P34928 88 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Fgf17P63075 216 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Dgcr2P98154 548 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Nt5c3bQ3UFY7 300 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Q504N7 393 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 TardbpQ921F2 414 aaKnown RBP14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Cldnd2Q9D9H2 167 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Pla2g12aQ9EPR2 192 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Zfp955bL7N232 545 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 MgllO35678 303 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Cdh26P59862 763 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Crabp1P62965 137 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm5127Q3UQH6 212 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Tas2r120Q7M721 295 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Rtn4rl1Q8K0S5 445 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Sirt4Q8R216 333 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Thap7Q8VCZ3 309 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Plpp7Q91WB2 271 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 PtgesQ9JM51 153 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Dpy19l1A6X919 746 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr68E9PYY2 315 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Bloc1s1O55102 125 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Rpl18P35980 188 aaKnown RBP14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Kcnn3P58391 732 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Tmprss11cQ1JRP2 431 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr304Q7TS03 333 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Slc16a12Q8BGC3 486 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Ikzf4Q8C208 586 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 NotumQ8R116 503 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Vopp1Q8R1C3 172 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Spryd4Q91WK1 207 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Phf19Q9CXG9 578 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Actl11Q9D5V1 1207 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Slco2a1Q9EPT5 643 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 IckQ9JKV2 629 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Zfp53Q9Z117 652 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Itgb4A2A863 1818 aa14.33□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm12789B1AUV7 164 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Efna1P52793 205 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Rps15P62843 145 aaKnown RBP14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Tubg1P83887 451 aaKnown RBP14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Milr1Q3TB92 246 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm2016Q3TQZ4 144 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Ccdc190Q3URK1 288 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr591Q7TRR7 314 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr285Q7TS17 319 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 RinlQ80UW3 563 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Slc30a8Q8BGG0 367 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 P2ry12Q9CPV9 347 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Cdca5Q9CPY3 264 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Cd302Q9DCG2 228 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Nox4Q9JHI8 578 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Qtrt1Q9JMA2 403 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Clec4eQ9R0Q8 214 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm4788E9Q8B5 879 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Tmem14aP56983 99 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Fbxo7Q3U7U3 523 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Serinc4Q5XK03 492 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr598Q7TRR2 319 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Acp6Q8BP40 418 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Iglon5Q8HW98 336 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr935Q8VG16 308 aa14.32□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 93.4 ms