RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ALG10BQ5I7T1 473 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 LEG1Q6P5S2 330 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 MTSS1LQ765P7 747 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 ACBD4Q8NC06 268 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 OR4K14Q8NGD5 310 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 OR6S1Q8NH40 331 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 OR10G6Q8NH81 332 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 ZBTB8AQ96BR9 441 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 AKR1E2Q96JD6 320 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 TMEM106CQ9BVX2 250 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 MTHFD2LQ9H903 347 aaPredicted RBP12.5□□□□□ -0.41
SCARB2-227ENST00000640957 PRSS16Q9NQE7 514 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 PRDM7Q9NQW5 492 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 CALML5Q9NZT1 146 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 SLC22A13Q9Y226 551 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 A0A1W2PP55 124 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 GGT3PA6NGU5 568 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 ADH1CP00326 375 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 MUC1P15941 1255 aaPredicted RBP12.5□□□□□ -0.41
SCARB2-227ENST00000640957 PRKAR1BP31321 381 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 EMDP50402 254 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 CCR4P51679 360 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 PSMD4P55036 377 aaKnown RBP12.5□□□□□ -0.41
SCARB2-227ENST00000640957 C2orf76Q3KRA6 126 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 SLC48A1Q6P1K1 146 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 ABHD17CQ6PCB6 329 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 FAM122BQ7Z309 247 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 DPY19L4Q7Z388 723 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 LURAP1LQ8IV03 231 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 GABRG1Q8N1C3 465 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 SETD7Q8WTS6 366 aaKnown RBP12.5□□□□□ -0.41
SCARB2-227ENST00000640957 PFDN5Q99471 154 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 PLEKHA1Q9HB21 404 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 GPN3Q9UHW5 284 aaPredicted RBP12.5□□□□□ -0.41
SCARB2-227ENST00000640957 TBX21Q9UL17 535 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 BCL2L11O43521 198 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 CTAG2O75638 210 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 LSSP48449 732 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 MOGAT2Q3SYC2 334 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 CDNFQ49AH0 187 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 OR2L13Q8N349 312 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 BPIFB2Q8N4F0 458 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 OR6N2Q8NGY6 317 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 OR14C36Q8NHC7 312 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 MRGPRX3Q96LB0 322 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 SMIM3Q9BZL3 60 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 UQCC1Q9NVA1 299 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 ASH2LQ9UBL3 628 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 ATXN7L1Q9ULK2 861 aaPredicted RBP12.5□□□□□ -0.41
SCARB2-227ENST00000640957 REV3LO60673 3130 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 EFCAB7A8K855 629 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 IFNGP01579 166 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 NME1P15531 152 aaKnown RBP12.49□□□□□ -0.41
SCARB2-227ENST00000640957 ZNF44P15621 663 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 SGCGQ13326 291 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 PPP1R1AQ13522 171 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 ATPAF1Q5TC12 328 aaPredicted RBP12.49□□□□□ -0.41
SCARB2-227ENST00000640957 BAIAP2L2Q6UXY1 529 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 PRSS41Q7RTY9 318 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 ARMC10Q8N2F6 343 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 IP6K3Q96PC2 410 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 SYNDIG1Q9H7V2 258 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 CSAG2Q9Y5P2 127 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 MSGN1A6NI15 193 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 C1orf196B1AJZ1 125 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 M0R036 132 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 ZNF208O43345 1280 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 RNGTTO60942 597 aaKnown RBP12.49□□□□□ -0.41
SCARB2-227ENST00000640957 HLA-DQA2P01906 255 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 OR2T7P0C7T2 308 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 ZNF888P0CJ79 500 aaPredicted RBP12.49□□□□□ -0.41
SCARB2-227ENST00000640957 RAB5BP61020 215 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 CXADRP78310 365 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 CDCP2Q5VXM1 449 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 CHST4Q8NCG5 386 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 OR6N1Q8NGY5 312 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 OR2T27Q8NH04 317 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 CST11Q9H112 138 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 WDR76Q9H967 626 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 GSKIPQ9P0R6 139 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 TNFSF18Q9UNG2 199 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 A0A087WV62 115 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 TYRP1P17643 537 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 SPI1P17947 270 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 RCC1P18754 421 aaPredicted RBP12.49□□□□□ -0.41
SCARB2-227ENST00000640957 CEBPGP53567 150 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 ACTC1P68032 377 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 ACTA1P68133 377 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 REEP5Q00765 189 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 GJD3Q8N144 294 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 RAB42Q8N4Z0 105 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 KCNRGQ8N5I3 272 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 MRPL43Q8N983 215 aaKnown RBP12.49□□□□□ -0.41
SCARB2-227ENST00000640957 ADAD2Q8NCV1 583 aaKnown RBP12.49□□□□□ -0.41
SCARB2-227ENST00000640957 OR5T3Q8NGG3 340 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 OR2A1Q8NGT9 310 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 OR2L2Q8NH16 312 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 STOML3Q8TAV4 291 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 INSM2Q96T92 566 aaPredicted RBP12.49□□□□□ -0.41
SCARB2-227ENST00000640957 AMELYQ99218 206 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms