RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 NKAIN3Q8N8D7 197 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 RAB3CQ96E17 227 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 FOXJ3Q9UPW0 622 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 RPH3AQ9Y2J0 694 aaPredicted RBP13.4□□□□□ -0.26
VPS36-207ENST00000611132 PUS1Q9Y606 427 aaKnown RBP eCLIP13.4□□□□□ -0.26
VPS36-207ENST00000611132 FAM230AA0A1W2PPH8 454 aa13.4□□□□□ -0.27
VPS36-207ENST00000611132 GSTZ1O43708 216 aaPredicted RBP13.4□□□□□ -0.27
VPS36-207ENST00000611132 TUSC1Q2TAM9 212 aa13.4□□□□□ -0.27
VPS36-207ENST00000611132 MAMSTRQ6ZN01 415 aa13.4□□□□□ -0.27
VPS36-207ENST00000611132 TRILQ7L0X0 811 aa13.4□□□□□ -0.27
VPS36-207ENST00000611132 PNPLA2Q96AD5 504 aa13.4□□□□□ -0.27
VPS36-207ENST00000611132 SIGLEC11Q96RL6 698 aa13.4□□□□□ -0.27
VPS36-207ENST00000611132 PTGES2Q9H7Z7 377 aa13.4□□□□□ -0.27
VPS36-207ENST00000611132 PLEKHJ1Q9NW61 149 aa13.4□□□□□ -0.27
VPS36-207ENST00000611132 SPHK1Q9NYA1 384 aa13.4□□□□□ -0.27
VPS36-207ENST00000611132 COL11A1P12107 1806 aaPredicted RBP13.4□□□□□ -0.27
VPS36-207ENST00000611132 CXorf51AA0A1B0GTR3 108 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 TMEM235A6NFC5 223 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 TRIM77I1YAP6 450 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 CDK2AP1O14519 115 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 CDC42EP2O14613 210 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 GLSO94925 669 aaPredicted RBP13.39□□□□□ -0.27
VPS36-207ENST00000611132 DIRAS3O95661 229 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 CTRB1P17538 263 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 TAS2R46P59540 309 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 B3GNTL1Q67FW5 361 aaPredicted RBP13.39□□□□□ -0.27
VPS36-207ENST00000611132 CTRB2Q6GPI1 263 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 TMEM65Q6PI78 240 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 MUC20Q8N307 709 aaPredicted RBP13.39□□□□□ -0.27
VPS36-207ENST00000611132 AMER3Q8N944 861 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 TSSK2Q96PF2 358 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 OR5B12Q96R08 314 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 UBL7Q96S82 380 aaPredicted RBP13.39□□□□□ -0.27
VPS36-207ENST00000611132 C20orf141Q9NUB4 165 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 APOBEC3BQ9UH17 382 aaKnown RBP13.39□□□□□ -0.27
VPS36-207ENST00000611132 ANKRD31Q8N7Z5 1873 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 RAB19A4D1S5 217 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 CTDSPLO15194 276 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 IFNA4P05014 189 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 CTSLP07711 333 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 CD80P33681 288 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 PMPCAQ10713 525 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 KIAA0907Q7Z7F0 614 aaPredicted RBP13.39□□□□□ -0.27
VPS36-207ENST00000611132 TEX19Q8NA77 164 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 BPIFCQ8NFQ6 507 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 OR4D9Q8NGE8 314 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 NANPQ8TBE9 248 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 KLHDC7BQ96G42 594 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 GPA33Q99795 319 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 ADGRL4Q9HBW9 690 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 GFOD1Q9NXC2 390 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 CYB5R1Q9UHQ9 305 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 DOK2O60496 412 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 CBX7O95931 251 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 IFNA1P01562 189 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 NSDHLQ15738 373 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 Q5BKY6 102 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 SLC22A24Q8N4F4 322 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 FAM181AQ8N9Y4 354 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 CCDC71LQ8N9Z2 235 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 ELF4Q99607 663 aaPredicted RBP13.39□□□□□ -0.27
VPS36-207ENST00000611132 WDR77Q9BQA1 342 aaPredicted RBP13.39□□□□□ -0.27
VPS36-207ENST00000611132 TMEM59Q9BXS4 323 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 HDAC8Q9BY41 377 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 MTFP1Q9UDX5 166 aa13.39□□□□□ -0.27
VPS36-207ENST00000611132 CKAP5Q14008 2032 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 PMP2P02689 132 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 HOXC8P31273 242 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 ALDH3B1P43353 468 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 GUCA2AQ02747 115 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 SSBP1Q04837 148 aaKnown RBP13.38□□□□□ -0.27
VPS36-207ENST00000611132 ERV3-1Q14264 604 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 SOHLH1Q5JUK2 328 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 ZNF793Q6ZN11 406 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 MCATQ8IVS2 390 aaKnown RBP13.38□□□□□ -0.27
VPS36-207ENST00000611132 OR14A16Q8NHC5 309 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 THAP3Q8WTV1 239 aaPredicted RBP13.38□□□□□ -0.27
VPS36-207ENST00000611132 SPIN2AQ99865 258 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 SPIN2BQ9BPZ2 258 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 MS4A7Q9GZW8 240 aaPredicted RBP13.38□□□□□ -0.27
VPS36-207ENST00000611132 SLC6A17Q9H1V8 727 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 TCEAL2Q9H3H9 227 aaPredicted RBP13.38□□□□□ -0.27
VPS36-207ENST00000611132 SERTAD3Q9UJW9 196 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 FBXL4Q9UKA2 621 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 PLEKHM1Q9Y4G2 1056 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 DSPPQ9NZW4 1301 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 B3GALNT1O75752 331 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 SERPINF1P36955 418 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 MAGEB1P43366 347 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 LIMS1P48059 325 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 SLC26A5P58743 744 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 RSU1Q15404 277 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 DMKNQ6E0U4 476 aaPredicted RBP13.38□□□□□ -0.27
VPS36-207ENST00000611132 USP53Q70EK8 1073 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 OR56B1Q8NGI3 324 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 SLAMF9Q96A28 289 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 TGM7Q96PF1 710 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 LDAHQ9H6V9 325 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 LYRM4Q9HD34 91 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 C1orf123Q9NWV4 160 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms