RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 MAN2C1Q9NTJ4 1040 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 C20orf141Q9NUB4 165 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 MED29Q9NX70 200 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 STX18Q9P2W9 335 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 V9GYQ6 96 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 SVEP1Q4LDE5 3571 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 A0A1W2PRQ8 180 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 UBOX5O94941 541 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 PRSS23O95084 383 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 BCL10O95999 233 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 TGFAP01135 160 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 FABP3P05413 133 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 SAGP10523 405 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 GIFP27352 417 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 CALCRP30988 508 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 SLC9A3P48764 834 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 DGCR6Q14129 220 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 CARTPTQ16568 116 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 CARD17Q5XLA6 110 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 TMEM123Q8N131 208 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 OR6X1Q8NH79 312 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 ZNF347Q96SE7 839 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 EMC6Q9BV81 110 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 GPR35Q9HC97 309 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 INIPQ9NRY2 104 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 TMEM5Q9Y2B1 443 aa15.18■□□□□ 0.02
SHKBP1-203ENST00000594298 A0A087WUU8 490 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 A0A096LPE4 126 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 A0A1W2PPZ6 126 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 EFCAB9A8MZ26 197 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 hCG_2039718K7EN88 272 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 M0R3G1 203 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 GYG2O15488 501 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 TACSTD2P09758 323 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 CBR1P16152 277 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 CSNK1A1P48729 337 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 DAP3P51398 398 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 BIDP55957 195 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 TUBA1BP68363 451 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 TUBA4AP68366 448 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 HGFACQ04756 655 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 RPL18Q07020 188 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 TAF11Q15544 211 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 FGD3Q5JSP0 725 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 VHLLQ6RSH7 139 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 TUBA1AQ71U36 451 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 TSEN54Q7Z6J9 526 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 CCDC36Q8IYA8 594 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 FAM86B1Q8N7N1 296 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 NEU4Q8WWR8 484 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 SLC25A44Q96H78 314 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 LRGUKQ96M69 825 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 DOK1Q99704 481 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 THTPAQ9BU02 230 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 NDEL1Q9GZM8 345 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 SEC61A2Q9H9S3 476 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 CRLF2Q9HC73 371 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 IL1RAPQ9NPH3 570 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 ARFGEF3Q5TH69 2177 aa15.17■□□□□ 0.02
SHKBP1-203ENST00000594298 VSTM5A8MXK1 200 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 MCIDASD6RGH6 385 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 PIP5K1CO60331 668 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 SEMG1P04279 462 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 ERCC1P07992 297 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 TSPAN19P0C672 248 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 AQP2P41181 271 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 RASSF2P50749 326 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 SRSF2Q01130 221 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 CAMK2DQ13557 499 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 LCN8Q6JVE9 175 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 CYP2R1Q6VVX0 501 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 TMPRSS11FQ6ZWK6 438 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 OAFQ86UD1 273 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 SLC7A13Q8TCU3 470 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 HPS1Q92902 700 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 ZNF566Q969W8 418 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 ASB9Q96DX5 294 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 SOX7Q9BT81 388 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 ULBP2Q9BZM5 246 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 TRIM15Q9C019 465 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 POFUT2Q9Y2G5 429 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 HIF3AQ9Y2N7 669 aa15.16■□□□□ 0.02
SHKBP1-203ENST00000594298 NPIPB13A6NJU9 1138 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 CENPBD1B2RD01 187 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 NPIPB4C9JG80 1138 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 ENTPD5O75356 428 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 ATP5HO75947 161 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 GADD45GO95257 159 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 IGHG1P01857 330 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 F13BP05160 661 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 DAOP14920 347 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 NPR2P20594 1047 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 MAKP20794 623 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 THBS4P35443 961 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 ARR3P36575 388 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 CHN2P52757 468 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 ARF1P84077 181 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 TRAP1Q12931 704 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 LAPTM4AQ15012 233 aa15.15■□□□□ 0.02
SHKBP1-203ENST00000594298 CR1LQ2VPA4 569 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms