RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TMED7-TICAM2A0A0A6YYA0 188 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 L7N2F9 121 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 GOSR2O14653 212 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 GDF9O60383 454 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 PNPP00491 289 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 DCNP07585 359 aaKnown RBP12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 ZNF250P15622 560 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 ABCD3P28288 659 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 FUT7Q11130 342 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 SERTAD2Q14140 314 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 SFRP5Q5T4F7 317 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 NLRC3Q7RTR2 1065 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 GALNT6Q8NCL4 622 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 OR11G2Q8NGC1 345 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 SUN5Q8TC36 379 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 CMBLQ96DG6 245 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 SLC25A44Q96H78 314 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 RANBP3Q9H6Z4 567 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 ZFP64Q9NPA5 681 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 HAO2Q9NYQ3 351 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 TMED7Q9Y3B3 224 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 PCDHGA9Q9Y5G4 932 aaKnown RBP12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 DOCK7Q96N67 2140 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 SVILO95425 2214 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 IGHV1OR15-9A0A0B4J2B8 117 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 TLCD2A6NGC4 264 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 CD3DP04234 171 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 HOXC4P09017 264 aaPredicted RBP12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 ZNF28P17035 718 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 ENPP1P22413 925 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 FOXK1P85037 733 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 LGALSLQ3ZCW2 172 aaPredicted RBP12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 PRAMEF20Q5VT98 475 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 C9orf40Q8IXQ3 194 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 SMRP1Q8NCR6 262 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 CASTOR1Q8WTX7 329 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 SCMH1Q96GD3 660 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 POLE3Q9NRF9 147 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 TAS2R4Q9NYW5 299 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 SUSD2Q9UGT4 822 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 GMEB2Q9UKD1 530 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 TRAV1-2A0A0B4J238 106 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 MFGE8Q08431 387 aaPredicted RBP12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 EXOSC2Q13868 293 aaKnown RBP12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 BTN2A1Q7KYR7 527 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 GRAMD2AQ8IUY3 354 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 NXPE2Q96DL1 559 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 OR2M2Q96R28 347 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 MNTQ99583 582 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 ARL6Q9H0F7 186 aa12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 MRTO4Q9UKD2 239 aaKnown RBP12.35□□□□□ -0.43
PRPF40B-209ENST00000548825 RALGAPA1Q6GYQ0 2036 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 A0A1W2PPL8 197 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 P2RY10O00398 339 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 SEC14L5O43304 696 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 SC5DO75845 299 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 ITGA5P08648 1049 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 IFNGR1P15260 489 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 AP3S2P59780 193 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 KLF9Q13886 244 aaPredicted RBP12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 RSPO4Q2I0M5 234 aaPredicted RBP12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 COL28A1Q2UY09 1125 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 ARSKQ6UWY0 536 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 OVCH1Q7RTY7 1134 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 MAMDC2Q7Z304 686 aaPredicted RBP12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 OR4S1Q8NGB4 309 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 DAZLQ92904 295 aaKnown RBP12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 SEC22AQ96IW7 307 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 ZNF436Q9C0F3 470 aaPredicted RBP12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 VN1R1Q9GZP7 353 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 CHST6Q9GZX3 395 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 DIABLOQ9NR28 239 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 DLL4Q9NR61 685 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 MUC22E2RYF6 1773 aaPredicted RBP12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 UBE2QL1A1L167 161 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 NPIPA5E9PKD4 350 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 CCSO14618 274 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 CREBL2O60519 120 aaPredicted RBP12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 PPICP45877 212 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 EFNA3P52797 238 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 PRSS12P56730 875 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 HNRNPKP61978 463 aaKnown RBP eCLIP12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 DND1Q8IYX4 353 aaKnown RBP12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 OR13C3Q8NGS6 347 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 OR2I1PQ8NGU4 316 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 LRRC20Q8TCA0 184 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 CCDC74AQ96AQ1 378 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 MAP6Q96JE9 813 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 UBL7Q96S82 380 aaPredicted RBP12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 PDCD10Q9BUL8 212 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 ANKRD10Q9NXR5 420 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 NPIPA1Q9UND3 350 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 FOXJ3Q9UPW0 622 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 A0A1W2PNR3 127 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 NPIPB9F8W1W9 429 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 ARPC3O15145 178 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 GPRIN2O60269 458 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 ICMTO60725 284 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 UPK3AO75631 287 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms