RNA–Protein interactions for RNA: ENST00000548247.1

RACGAP1-211, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 564 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-211	ENST00000548247	VSTM5	A8MXK1	200 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	RNF13	O43567	381 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	KRT34	O76011	436 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	B4GALT1	P15291	398 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	TNFRSF1B	P20333	461 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	GSG1	Q2KHT4	349 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	ERICH5	Q6P6B1	374 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	C1QL2	Q7Z5L3	287 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	IL17RD	Q8NFM7	739 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	OR6X1	Q8NH79	312 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	C22orf15	Q8WYQ4	148 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	TMEM54	Q969K7	222 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	YIPF5	Q969M3	257 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	ZNF583	Q96ND8	569 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	FOXB1	Q99853	325 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	C1QTNF5	Q9BXJ0	243 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	MRPL37	Q9BZE1	423 aa	Known RBP	11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	NOX3	Q9HBY0	568 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	ZNF275	Q9NSD4	429 aa	Predicted RBP	11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	ZNF446	Q9NWS9	450 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	BAG5	Q9UL15	447 aa		11.29	□□□□□ -0.6
RACGAP1-211	ENST00000548247	BCL10	O95999	233 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	HIST1H2AB	P04908	130 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	ASAH2B	P0C7U1	165 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	UMPS	P11172	480 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	ACHE	P22303	614 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	ZFP36	P26651	326 aa	Known RBP	11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	SEC24C	P53992	1094 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	TAS2R41	P59536	307 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	GUCY1A3	Q02108	690 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	PIGF	Q07326	219 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	SNTB2	Q13425	540 aa	Known RBP	11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	DAG1	Q14118	895 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	MELK	Q14680	651 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	HIST2H2BD	Q6DRA6	164 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	KRT80	Q6KB66	452 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	HIST3H2A	Q7L7L0	130 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	NANOGNB	Q7Z5D8	188 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	PCYOX1L	Q8NBM8	494 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	C10orf82	Q8WW14	230 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	RDH5	Q92781	318 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	HIST1H2AC	Q93077	130 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	MS4A3	Q96HJ5	214 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	POLR2J2	Q9GZM3	115 aa	Known RBP	11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	POLR2J3	Q9H1A7	115 aa	Known RBP	11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	MEPE	Q9NQ76	525 aa	Predicted RBP	11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	GID8	Q9NWU2	228 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	GLTP	Q9NZD2	209 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	ZNF224	Q9NZL3	707 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	ARMCX1	Q9P291	453 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	REV1	Q9UBZ9	1251 aa		11.28	□□□□□ -0.6
RACGAP1-211	ENST00000548247	WNK1	Q9H4A3	2382 aa		11.27	□□□□□ -0.6
RACGAP1-211	ENST00000548247	FAM220BP	B1ANY3	271 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	BLOC1S5-TXNDC5	H3BN57	136 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	SYNGR3	O43761	229 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	SHOX2	O60902	331 aa	Predicted RBP	11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	OR5F1	O95221	314 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	RAB36	O95755	333 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	IFNA14	P01570	189 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	ZNF14	P17017	642 aa	Predicted RBP	11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	OR1E2	P47887	323 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	GIPR	P48546	466 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	PTDSS1	P48651	473 aa	Known RBP	11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	TMEM33	P57088	247 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	RAB1A	P62820	205 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	MYBPC1	Q00872	1141 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	PIWIL3	Q7Z3Z3	882 aa	Known RBP	11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	NKAIN4	Q8IVV8	208 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	BPIFB2	Q8N4F0	458 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	TEX29	Q8N6K0	151 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	PFN4	Q8NHR9	129 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	ZNF566	Q969W8	418 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	SLC25A44	Q96H78	314 aa	Predicted RBP	11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	ZNF75A	Q96N20	296 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	UNKL	Q9H9P5	680 aa	Known RBP	11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	DDX28	Q9NUL7	540 aa	Known RBP	11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	RIMS3	Q9UJD0	308 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	CMAHP	Q9Y471	501 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	CAPN7	Q9Y6W3	813 aa		11.27	□□□□□ -0.61
RACGAP1-211	ENST00000548247	ARHGAP32	A7KAX9	2087 aa		11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247		M0R233	179 aa		11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	PPIH	O43447	177 aa	Known RBP	11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	PLPP2	O43688	288 aa		11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	RP2	O75695	350 aa		11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	NCR1	O76036	304 aa		11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	OR7A10	O76100	309 aa		11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	UBL3	O95164	117 aa		11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	MT-ND1	P03886	318 aa		11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	PGA4	P0DJD7	388 aa		11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	PGA3	P0DJD8	388 aa		11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	FUT1	P19526	365 aa		11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	NR4A1	P22736	598 aa		11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	KDELR2	P33947	212 aa		11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	RBM34	P42696	430 aa	Known RBP	11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	ALDH3B1	P43353	468 aa		11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	UGT2B15	P54855	530 aa		11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	RPL18	Q07020	188 aa	Known RBP	11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	PIN1	Q13526	163 aa	Predicted RBP	11.26	□□□□□ -0.61
RACGAP1-211	ENST00000548247	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms