RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 MSMPQ1L6U9 139 aa14.7□□□□□ -0.06
SQLE-205ENST00000521232 ANKDD1AQ495B1 522 aa14.7□□□□□ -0.06
SQLE-205ENST00000521232 SLC16A14Q7RTX9 510 aa14.7□□□□□ -0.06
SQLE-205ENST00000521232 TSEN54Q7Z6J9 526 aaKnown RBP14.7□□□□□ -0.06
SQLE-205ENST00000521232 CPLX4Q7Z7G2 160 aa14.7□□□□□ -0.06
SQLE-205ENST00000521232 LRRC75AQ8NAA5 344 aa14.7□□□□□ -0.06
SQLE-205ENST00000521232 NEU4Q8WWR8 484 aaPredicted RBP14.7□□□□□ -0.06
SQLE-205ENST00000521232 ACOT11Q8WXI4 607 aaPredicted RBP14.7□□□□□ -0.06
SQLE-205ENST00000521232 HDAC2Q92769 488 aaKnown RBP14.7□□□□□ -0.06
SQLE-205ENST00000521232 MRPL24Q96A35 216 aaKnown RBP14.7□□□□□ -0.06
SQLE-205ENST00000521232 HSH2DQ96JZ2 352 aa14.7□□□□□ -0.06
SQLE-205ENST00000521232 KCNK17Q96T54 332 aa14.7□□□□□ -0.06
SQLE-205ENST00000521232 NSRP1Q9H0G5 558 aaKnown RBP14.7□□□□□ -0.06
SQLE-205ENST00000521232 SMURF2Q9HAU4 748 aa14.7□□□□□ -0.06
SQLE-205ENST00000521232 ZNF346Q9UL40 294 aaKnown RBP14.7□□□□□ -0.06
SQLE-205ENST00000521232 SVEP1Q4LDE5 3571 aa14.7□□□□□ -0.06
SQLE-205ENST00000521232 A0A087WUU8 490 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 IGHMP01871 453 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 NCK1P16333 377 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 USF1P22415 310 aaPredicted RBP14.69□□□□□ -0.06
SQLE-205ENST00000521232 RPL27P61353 136 aaKnown RBP14.69□□□□□ -0.06
SQLE-205ENST00000521232 MRPS34P82930 218 aaKnown RBP14.69□□□□□ -0.06
SQLE-205ENST00000521232 GALK2Q01415 458 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 SLC36A2Q495M3 483 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 GLYATQ6IB77 296 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 TMEM53Q6P2H8 277 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 MBOAT2Q6ZWT7 520 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 CDK20Q8IZL9 346 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 ZCCHC24Q8N2G6 241 aaKnown RBP14.69□□□□□ -0.06
SQLE-205ENST00000521232 FAM162AQ96A26 154 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 FOXN4Q96NZ1 517 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 MRPL37Q9BZE1 423 aaKnown RBP14.69□□□□□ -0.06
SQLE-205ENST00000521232 FAM107BQ9H098 131 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 C1orf198Q9H425 327 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 ANKRD19PQ9H560 264 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 RNF121Q9H920 327 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 SIAEQ9HAT2 523 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 SPAG4Q9NPE6 437 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 YAE1D1Q9NRH1 226 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 SLC7A8Q9UHI5 535 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 RPS6KA6Q9UK32 745 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 ENPP4Q9Y6X5 453 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 DNHD1Q96M86 4753 aa14.69□□□□□ -0.06
SQLE-205ENST00000521232 ATRQ13535 2644 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 SH3PXD2BA1X283 911 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 SLC2A10O95528 541 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 ERCC1P07992 297 aaPredicted RBP14.68□□□□□ -0.06
SQLE-205ENST00000521232 MMP7P09237 267 aaPredicted RBP14.68□□□□□ -0.06
SQLE-205ENST00000521232 SAGP10523 405 aaPredicted RBP14.68□□□□□ -0.06
SQLE-205ENST00000521232 NR2C1P13056 603 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 NR4A2P43354 598 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 SLC9A3P48764 834 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 CTXN1P60606 82 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 RPS23P62266 143 aaKnown RBP14.68□□□□□ -0.06
SQLE-205ENST00000521232 GKAP1Q5VSY0 366 aaPredicted RBP14.68□□□□□ -0.06
SQLE-205ENST00000521232 SLC25A47Q6Q0C1 308 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 TBPL2Q6SJ96 375 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 TMPRSS11FQ6ZWK6 438 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 OAFQ86UD1 273 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 CYP4Z1Q86W10 505 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 SLC30A7Q8NEW0 376 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 OR51A7Q8NH64 312 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 FNDC8Q8TC99 324 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 PIMREGQ9BSJ6 248 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 ALG12Q9BV10 488 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 NMNAT1Q9HAN9 279 aaPredicted RBP14.68□□□□□ -0.06
SQLE-205ENST00000521232 DCAF13Q9NV06 445 aaKnown RBP14.68□□□□□ -0.06
SQLE-205ENST00000521232 EGFL7Q9UHF1 273 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 ADAM21Q9UKJ8 722 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 UGT2A1Q9Y4X1 527 aa14.68□□□□□ -0.06
SQLE-205ENST00000521232 MALRD1Q5VYJ5 2156 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 TRAV27A0A087WT01 109 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 IGKV1D-43A0A0B4J1Z2 117 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 SLC22A23A1A5C7 686 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 A8MV72 311 aaPredicted RBP14.67□□□□□ -0.06
SQLE-205ENST00000521232 EFCAB9A8MZ26 197 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 SYNGR3O43761 229 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 STAMBPO95630 424 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 PTHP01270 115 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 ADRA2AP08913 450 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 THEM4Q5T1C6 240 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 C6orf52Q5T4I8 152 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 ZNF730Q6ZMV8 503 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 MEX3DQ86XN8 651 aaKnown RBP14.67□□□□□ -0.06
SQLE-205ENST00000521232 HIPK1Q86Z02 1210 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 LRRC18Q8N456 261 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 FAM156AQ8NDB6 213 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 ZNF540Q8NDQ6 660 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 RBM15BQ8NDT2 890 aaKnown RBP14.67□□□□□ -0.06
SQLE-205ENST00000521232 NABP1Q96AH0 204 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 RBP7Q96R05 134 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 DYNLRB1Q9NP97 96 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 CUBNO60494 3623 aa14.67□□□□□ -0.06
SQLE-205ENST00000521232 SNAP29O95721 258 aa14.66□□□□□ -0.06
SQLE-205ENST00000521232 DAOP14920 347 aa14.66□□□□□ -0.06
SQLE-205ENST00000521232 GIFP27352 417 aa14.66□□□□□ -0.06
SQLE-205ENST00000521232 CDAP32320 146 aa14.66□□□□□ -0.06
SQLE-205ENST00000521232 PLP2Q04941 152 aa14.66□□□□□ -0.06
SQLE-205ENST00000521232 FMODQ06828 376 aa14.66□□□□□ -0.06
SQLE-205ENST00000521232 CD47Q08722 323 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms