RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 LRMDAQ9H2I8 198 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 C1orf198Q9H425 327 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 SELENONQ9NZV5 590 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 NPTNQ9Y639 398 aa17.15■□□□□ 0.34
SQSTM1-215ENST00000514093 IQCMA0A1B0GVH7 501 aa17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 MDFIC2A0A1B0GVS7 189 aa17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 SDHDO14521 159 aa17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 TM9SF1O15321 606 aa17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 DHHO43323 396 aa17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 MFN2O95140 757 aa17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 SLC36A2Q495M3 483 aa17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 FAM91A1Q658Y4 838 aa17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 C16orf87Q6PH81 154 aa17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 SLC35D2Q76EJ3 337 aa17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 LRRC18Q8N456 261 aa17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 RBM15BQ8NDT2 890 aaKnown RBP17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 OR6X1Q8NH79 312 aa17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 BBS10Q8TAM1 723 aa17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 WDR55Q9H6Y2 383 aaPredicted RBP17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 THUMPD1Q9NXG2 353 aaKnown RBP17.14■□□□□ 0.33
SQSTM1-215ENST00000514093 WNK1Q9H4A3 2382 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 PLSCR5A0PG75 271 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 C5orf58C9J3I9 102 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 OR6A2O95222 327 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 KNG1P01042 644 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 PTHP01270 115 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 IGHV2-70P01814 119 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 IL6P05231 212 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 QDPRP09417 244 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 ZCCHC18P0CG32 403 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 PRKAR1BP31321 381 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 SLC6A9P48067 706 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 PLP2Q04941 152 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 OR1Q1Q15612 314 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 C17orf107Q6ZR85 190 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 ZNF101Q8IZC7 436 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 CPEB3Q8NE35 698 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 OR52E2Q8NGJ4 325 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 OR5J2Q8NH18 312 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 WFDC12Q8WWY7 111 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 ZNF566Q969W8 418 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 WFDC6Q9BQY6 131 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 EGLN1Q9GZT9 426 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 TMEM27Q9HBJ8 222 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 A4GALTQ9NPC4 353 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 TNFRSF19Q9NS68 423 aa17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 TESQ9UGI8 421 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-215ENST00000514093 A0A0B4J2E0 115 aa17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 A0A1B0GX12 115 aa17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 TPST2O60704 377 aa17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 ENTPD5O75356 428 aa17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 BGNP21810 368 aa17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 EPHA3P29320 983 aa17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 APLNRP35414 380 aa17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 NCALDP61601 193 aa17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 IFFO1Q0D2I5 559 aa17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 RGNQ15493 299 aa17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 ZNF718Q3SXZ3 478 aa17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 C6orf10Q5SRN2 563 aa17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 CEP85LQ5SZL2 805 aa17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 C1QL4Q86Z23 238 aa17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 EIF1ADQ8N9N8 165 aaKnown RBP17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 MARS2Q96GW9 593 aaKnown RBP17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 PATZ1Q9HBE1 687 aaKnown RBP17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 POLR3KQ9Y2Y1 108 aaPredicted RBP17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 MMP24Q9Y5R2 645 aa17.12■□□□□ 0.33
SQSTM1-215ENST00000514093 SLC22A3O75751 556 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 MMP7P09237 267 aaPredicted RBP17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 CD80P33681 288 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 WNT5AP41221 380 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 MTNR1AP48039 350 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 CDH12P55289 794 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 HSF2Q03933 536 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 PARP8Q8N3A8 854 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 NFKBIDQ8NI38 313 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 SLC25A40Q8TBP6 338 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 SLC25A44Q96H78 314 aaPredicted RBP17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 ITCHQ96J02 903 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 DIRC2Q96SL1 478 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 OR2J1Q9GZK6 312 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 MSL2Q9HCI7 577 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 TAS2R5Q9NYW4 299 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 HAO1Q9UJM8 370 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 ZNF281Q9Y2X9 895 aa17.11■□□□□ 0.33
SQSTM1-215ENST00000514093 FAM181BA6NEQ2 426 aa17.1■□□□□ 0.33
SQSTM1-215ENST00000514093 HOXA3O43365 443 aaPredicted RBP17.1■□□□□ 0.33
SQSTM1-215ENST00000514093 RNF13O43567 381 aa17.1■□□□□ 0.33
SQSTM1-215ENST00000514093 PGA4P0DJD7 388 aa17.1■□□□□ 0.33
SQSTM1-215ENST00000514093 PGA3P0DJD8 388 aa17.1■□□□□ 0.33
SQSTM1-215ENST00000514093 ETS2P15036 469 aa17.1■□□□□ 0.33
SQSTM1-215ENST00000514093 RGS8P57771 180 aaPredicted RBP17.1■□□□□ 0.33
SQSTM1-215ENST00000514093 PABPC1L2AQ5JQF8 200 aa17.1■□□□□ 0.33
SQSTM1-215ENST00000514093 DHRS4L2Q6PKH6 230 aa17.1■□□□□ 0.33
SQSTM1-215ENST00000514093 BRICD5Q6PL45 260 aa17.1■□□□□ 0.33
SQSTM1-215ENST00000514093 RHOUQ7L0Q8 258 aa17.1■□□□□ 0.33
SQSTM1-215ENST00000514093 DPPA2Q7Z7J5 298 aa17.1■□□□□ 0.33
SQSTM1-215ENST00000514093 KLHL36Q8N4N3 616 aa17.1■□□□□ 0.33
SQSTM1-215ENST00000514093 KLF14Q8TD94 323 aaPredicted RBP17.1■□□□□ 0.33
SQSTM1-215ENST00000514093 MCHR2Q969V1 340 aa17.1■□□□□ 0.33
SQSTM1-215ENST00000514093 ZNF347Q96SE7 839 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms