RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 GTPBP3Q969Y2 492 aaKnown RBP13.1□□□□□ -0.31
RNF4-210ENST00000508235 NMD3Q96D46 503 aaKnown RBP13.1□□□□□ -0.31
RNF4-210ENST00000508235 SAMD8Q96LT4 415 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 FEVQ99581 238 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 KCNS3Q9BQ31 491 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 C1QTNF6Q9BXI9 259 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 KCNN2Q9H2S1 579 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 TBC1D23Q9NUY8 699 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 IL20Q9NYY1 176 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 CRNNQ9UBG3 495 aaPredicted RBP13.1□□□□□ -0.31
RNF4-210ENST00000508235 SLC22A23A1A5C7 686 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 SOCS2O14508 198 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 ABCD4O14678 606 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 SLC2A10O95528 541 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 CD79AP11912 226 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 IST1P53990 364 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 GABPB1Q06547 395 aaPredicted RBP13.09□□□□□ -0.31
RNF4-210ENST00000508235 SLC36A2Q495M3 483 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 ADAM5Q6NVV9 412 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 ZFP1Q6P2D0 407 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 DNM1P34Q6PK57 102 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 C20orf204Q6ZNR8 217 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 CDH24Q86UP0 819 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 IL17RDQ8NFM7 739 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 DNAJC9Q8WXX5 260 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 NSMAFQ92636 917 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 NINJ1Q92982 152 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 RASD2Q96D21 266 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 SLC38A2Q96QD8 506 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 SNX18Q96RF0 628 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 EGLN3Q9H6Z9 239 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 SIAEQ9HAT2 523 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 BAIAP2Q9UQB8 552 aa13.09□□□□□ -0.31
RNF4-210ENST00000508235 HEATR1Q9H583 2144 aaKnown RBP13.09□□□□□ -0.31
RNF4-210ENST00000508235 CRYBG3Q68DQ2 2970 aa13.08□□□□□ -0.31
RNF4-210ENST00000508235 PRR14LQ5THK1 2151 aa13.08□□□□□ -0.31
RNF4-210ENST00000508235 HS3ST1O14792 307 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 RAB36O95755 333 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 RENP00797 406 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 IGKV3-15P01624 115 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 IGLV1-44P01699 117 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 RAF1P04049 648 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 CRABP1P29762 137 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 TUBA1BP68363 451 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 TUBA4AP68366 448 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 FMODQ06828 376 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 SLC22A25Q6T423 547 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 PAMR1Q6UXH9 720 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 TUBA1AQ71U36 451 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 SLC16A14Q7RTX9 510 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 HIPK1Q86Z02 1210 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 TEX47Q8TBZ9 253 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 NIPSNAP1Q9BPW8 284 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 UBTD1Q9HAC8 227 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 VSX1Q9NZR4 365 aaPredicted RBP13.08□□□□□ -0.32
RNF4-210ENST00000508235 ST6GALNAC2Q9UJ37 374 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 POU2F3Q9UKI9 436 aa13.08□□□□□ -0.32
RNF4-210ENST00000508235 UNC79Q9P2D8 2635 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 A0A1W2PPR1 153 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 CYSRT1A8MQ03 144 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 H7C1C5 153 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 KHDRBS3O75525 346 aaKnown RBP13.07□□□□□ -0.32
RNF4-210ENST00000508235 HLA-HP01893 362 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 CRYAAP02489 173 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 DNASE1P24855 282 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 LCN6P62502 163 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 NPRL3Q12980 569 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 KEAP1Q14145 624 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 KPNB1Q14974 876 aaKnown RBP13.07□□□□□ -0.32
RNF4-210ENST00000508235 CLEC12AQ5QGZ9 265 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 TMEM53Q6P2H8 277 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 TMEM179BQ7Z7N9 219 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 MDP1Q86V88 176 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 SKA3Q8IX90 412 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 ATG16L2Q8NAA4 619 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 OR2T33Q8NG76 320 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 OR5K1Q8NHB7 308 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 AKAP1Q92667 903 aaKnown RBP eCLIP13.07□□□□□ -0.32
RNF4-210ENST00000508235 FBXW5Q969U6 566 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 WACQ9BTA9 647 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 SYT4Q9H2B2 425 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 RNF121Q9H920 327 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 SEC61A2Q9H9S3 476 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 CCNB1IP1Q9NPC3 277 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 B3GNT2Q9NY97 397 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 KIF17Q9P2E2 1029 aa13.07□□□□□ -0.32
RNF4-210ENST00000508235 RAI1Q7Z5J4 1906 aaPredicted RBP13.07□□□□□ -0.32
RNF4-210ENST00000508235 ABCA4P78363 2273 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 IGKV1D-43A0A0B4J1Z2 117 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 IGHV1-18A0A0C4DH31 117 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 A0A1W2PPL8 197 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 SHISA9B4DS77 424 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 G3V2T6 193 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 H3BN98 237 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 BHLHE40O14503 412 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 SLC16A7O60669 478 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 PLAUP00749 431 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 PTHP01270 115 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 CECR9P0C854 216 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 HIST1H1CP16403 213 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms