RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 AQP1P29972 269 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 SRSF9Q13242 221 aaKnown RBP eCLIP5.04□□□□□ -1.6
USF3-202ENST00000478658 SRSF5Q13243 272 aaKnown RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 KIR2DS5Q14953 304 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 LRRC37A5PQ49AS3 106 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 CYB5R2Q6BCY4 276 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 SLC36A1Q7Z2H8 476 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 OR5AP2Q8NGF4 316 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 LRRC15Q8TF66 581 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 MOB3AQ96BX8 217 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 C16orf70Q9BSU1 422 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 KCNK12Q9HB15 430 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 MYOZ1Q9NP98 299 aaPredicted RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 DOK5Q9P104 306 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 MEGF6O75095 1541 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 DIP2AQ14689 1571 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 H3BSA7 217 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 NUPL2O15504 423 aaKnown RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 EEF1E1O43324 174 aaKnown RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 SEMA7AO75326 666 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 HSBP1O75506 76 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 IL13P35225 146 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 VIPR2P41587 438 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 PPOXP50336 477 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 CELF3Q5SZQ8 465 aaKnown RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 ZBTB44Q8NCP5 570 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 FAM131CQ96AQ9 280 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 ARRDC3Q96B67 414 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 OR5B2Q96R09 309 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 ISG20L2Q9H9L3 353 aaKnown RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 ZNF391Q9UJN7 358 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 F5H697 171 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 NDUFB2O95178 105 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 HPP00738 406 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 C5AR1P21730 350 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 EDNRBP24530 442 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 TSPOP30536 169 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 ICAM3P32942 547 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 VASPP50552 380 aaPredicted RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 SSR4P51571 173 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 MTPNP58546 118 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 ZNF90Q03938 601 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 TSTQ16762 297 aaKnown RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 H1FXQ92522 213 aaKnown RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 C10orf90Q96M02 699 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 EBF2Q9HAK2 575 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 GPR55Q9Y2T6 319 aaPredicted RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 XRCC2O43543 280 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 TSPAN13O95857 204 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 PTBP1P26599 531 aaKnown RBP eCLIP5.04□□□□□ -1.6
USF3-202ENST00000478658 CD82P27701 267 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 IDUAP35475 653 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 MDH2P40926 338 aaKnown RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 SEC13P55735 322 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 PKIAP61925 76 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 CACNG7P62955 275 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 NRG1Q02297 640 aaPredicted RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 ELOBQ15370 118 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 SEZ6Q53EL9 994 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 OR4A47Q6IF82 309 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 MEX3BQ6ZN04 569 aaKnown RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 NUFIP2Q7Z417 695 aaKnown RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 CSNK1A1LQ8N752 337 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 OR52N2Q8NGI0 321 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 DTD1Q8TEA8 209 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 ITFG2Q969R8 447 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 KTI12Q96EK9 354 aaPredicted RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 TMEM204Q9BSN7 226 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 ERVMER34-1Q9H9K5 563 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 SLC7A10Q9NS82 523 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 CACNG5Q9UF02 275 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 MRPS28Q9Y2Q9 187 aaKnown RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 LRRC7Q96NW7 1537 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 SCN1AP35498 2009 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 TRAV6A0A075B6T7 132 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 GPM6AP51674 278 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 TAS2R40P59535 323 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 VEZF1Q14119 521 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 C18orf21Q32NC0 220 aaPredicted RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 AGTRAPQ6RW13 159 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 CHST14Q8NCH0 376 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 MRGPRX2Q96LB1 330 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 KREMEN1Q96MU8 473 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 C11orf54Q9H0W9 315 aaPredicted RBP5.04□□□□□ -1.6
USF3-202ENST00000478658 LMAN1LQ9HAT1 526 aa5.04□□□□□ -1.6
USF3-202ENST00000478658 KCNQ2O43526 872 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 RBP4P02753 201 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 CSF3P09919 207 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 SMIM10L2AP0DMW4 78 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 SMIM10L2BP0DMW5 78 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 RRASP10301 218 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 MTNR1AP48039 350 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 ERVS71-1P61550 626 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 CTBSQ01459 385 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 PAX5Q02548 391 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 FAAP100Q0VG06 881 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 TARBP2Q15633 366 aaKnown RBP5.03□□□□□ -1.6
USF3-202ENST00000478658 TSPYL5Q86VY4 417 aaPredicted RBP5.03□□□□□ -1.6
USF3-202ENST00000478658 KIR3DL3Q8N743 410 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 Q8N9G6 341 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms