RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 P2RY4P51582 365 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 ATP12AP54707 1039 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 POU6F2P78424 691 aaPredicted RBP5.19□□□□□ -1.58
HDAC3-206ENST00000471968 MYL5Q02045 173 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 SNX1Q13596 522 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 PTGR1Q14914 329 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 DEFB136Q30KP8 78 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 SGO1Q5FBB7 561 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 EXOSC6Q5RKV6 272 aaKnown RBP5.19□□□□□ -1.58
HDAC3-206ENST00000471968 ARMC3Q5W041 872 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 SASS6Q6UVJ0 657 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 Q6ZR03 302 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 ARMC8Q8IUR7 673 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 SKA3Q8IX90 412 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 CMTM4Q8IZR5 234 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 C1orf52Q8N6N3 182 aaKnown RBP5.19□□□□□ -1.58
HDAC3-206ENST00000471968 ZNF645Q8N7E2 425 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 PIK3C3Q8NEB9 887 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 TNFRSF14Q92956 283 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 RNF183Q96D59 192 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 ZNF503Q96F45 646 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 CHMP6Q96FZ7 201 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 HOXD1Q9GZZ0 328 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 HSD3B7Q9H2F3 369 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 LRMDAQ9H2I8 198 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 TMED7-TICAM2A0A0A6YYA0 188 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 A6NDX4 124 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 LRRC30A6NM36 301 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 A8MZ25 164 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 H3BSH0 61 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 VAMP5O95183 116 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 FSTL3O95633 263 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 G6PDP11413 515 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 ARL1P40616 181 aaPredicted RBP5.18□□□□□ -1.58
HDAC3-206ENST00000471968 INSL3P51460 131 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 CDK16Q00536 496 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 PDZK1Q5T2W1 519 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 CARD17Q5XLA6 110 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 TTC19Q6DKK2 380 aaPredicted RBP5.18□□□□□ -1.58
HDAC3-206ENST00000471968 ZNF770Q6IQ21 691 aaPredicted RBP5.18□□□□□ -1.58
HDAC3-206ENST00000471968 MOGAT3Q86VF5 341 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 SGPP2Q8IWX5 399 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 C1orf87Q8N0U7 546 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 Q8N7P7 452 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 OR1J2Q8NGS2 313 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 ST8SIA4Q92187 359 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 PMM1Q92871 262 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 FOXB1Q99853 325 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 BTBD2Q9BX70 525 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 DERL2Q9GZP9 239 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 NAT10Q9H0A0 1025 aaKnown RBP5.18□□□□□ -1.58
HDAC3-206ENST00000471968 C1orf198Q9H425 327 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.18□□□□□ -1.58
HDAC3-206ENST00000471968 ACOT9Q9Y305 439 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 TMED7Q9Y3B3 224 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 CAPN7Q9Y6W3 813 aa5.18□□□□□ -1.58
HDAC3-206ENST00000471968 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 IGLV1-36A0A0B4J1U3 117 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 GNG14A0A1W2PPG7 69 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 ZNF208O43345 1280 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 UGDHO60701 494 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 FCN3O75636 299 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 ECDO95905 644 aaPredicted RBP5.17□□□□□ -1.58
HDAC3-206ENST00000471968 MBD3O95983 291 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 CSTAP01040 98 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 IGF1P05019 195 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 LPLP06858 475 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 ZNF43P17038 809 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 TSPAN8P19075 237 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 WNT5AP41221 380 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 CCNG1P51959 295 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 TPM4P67936 248 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 HOXA4Q00056 320 aaPredicted RBP5.17□□□□□ -1.58
HDAC3-206ENST00000471968 HSPB3Q12988 150 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 XKR7Q5GH72 579 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 ARL9Q6T311 187 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 ZNF627Q7L945 461 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 ZNF329Q86UD4 541 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 ZNF695Q8IW36 515 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 AGGF1Q8N302 714 aaeCLIP5.17□□□□□ -1.58
HDAC3-206ENST00000471968 ATG16L2Q8NAA4 619 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 MAIP1Q8WWC4 291 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 C1orf54Q8WWF1 131 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 CDS1Q92903 461 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 GIMAP5Q96F15 307 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 TSPAN17Q96FV3 270 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 NSUN5Q96P11 429 aaKnown RBP5.17□□□□□ -1.58
HDAC3-206ENST00000471968 OR2M2Q96R28 347 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 GRPEL1Q9HAV7 217 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 TBCCD1Q9NVR7 557 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 PITPNC1Q9UKF7 332 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 PACSIN2Q9UNF0 486 aaPredicted RBP5.17□□□□□ -1.58
HDAC3-206ENST00000471968 RASD1Q9Y272 281 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 LRP2P98164 4655 aa5.17□□□□□ -1.58
HDAC3-206ENST00000471968 IQCMA0A1B0GVH7 501 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 FAM95CA0A1B0GW59 222 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 PSMB11A5LHX3 300 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 SUPT3HB4E1H0 165 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 NPIPB9F8W1W9 429 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 DVL1O14640 695 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms