RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 DHRS1Q96LJ7 313 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 SEPHS2Q99611 448 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 TRAF4Q9BUZ4 470 aaPredicted RBP13□□□□□ -0.33
ATG4B-213ENST00000460211 ALG12Q9BV10 488 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 KCNN2Q9H2S1 579 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 SMURF2Q9HAU4 748 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 CBLN4Q9NTU7 201 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 TMEM38BQ9NVV0 291 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 TAS2R1Q9NYW7 299 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 ZNF346Q9UL40 294 aaKnown RBP13□□□□□ -0.33
ATG4B-213ENST00000460211 PLCE1Q9P212 2302 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 TRBV4-1A0A0J9YWV2 114 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 H7C1Q1 480 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 OVOL3O00110 214 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 GYG2O15488 501 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 KRT36O76013 467 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 NDUFB2O95178 105 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 IGHMP01871 453 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 RAB1AP62820 205 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 MYBPC1Q00872 1141 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 PIGFQ07326 219 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 DNAL1Q4LDG9 190 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 THEM4Q5T1C6 240 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 LCN8Q6JVE9 175 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 IGFN1Q86VF2 1251 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 LRRC75AQ8NAA5 344 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 THTPAQ9BU02 230 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 REPIN1Q9BWE0 567 aaKnown RBP12.99□□□□□ -0.33
ATG4B-213ENST00000460211 TRIM15Q9C019 465 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 RNF121Q9H920 327 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 B3GNT2Q9NY97 397 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 GRHPRQ9UBQ7 328 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 SPEF1Q9Y4P9 236 aa12.99□□□□□ -0.33
ATG4B-213ENST00000460211 RAI1Q7Z5J4 1906 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-213ENST00000460211 SH3PXD2BA1X283 911 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 FAM171A2A8MVW0 826 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 XKRYO14609 159 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 CDC42EP2O14613 210 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 OR10H3O60404 316 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 PDE5AO76074 875 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 CD14P08571 375 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 NPR2P20594 1047 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 RRM2P31350 389 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 OMPP47874 163 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 PTDSS1P48651 473 aaKnown RBP12.98□□□□□ -0.33
ATG4B-213ENST00000460211 ZNF133P52736 654 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-213ENST00000460211 ETFDHQ16134 617 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 SLC36A2Q495M3 483 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 IQCCQ4KMZ1 466 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 FAM98BQ52LJ0 330 aaKnown RBP12.98□□□□□ -0.33
ATG4B-213ENST00000460211 TMEM53Q6P2H8 277 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 B3GLCTQ6Y288 498 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 SLC16A14Q7RTX9 510 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 SKA3Q8IX90 412 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 ARIH2OSQ8N7S6 290 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 HDAC2Q92769 488 aaKnown RBP12.98□□□□□ -0.33
ATG4B-213ENST00000460211 ASB9Q96DX5 294 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 MAGIXQ9H6Y5 334 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 BARX1Q9HBU1 254 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-213ENST00000460211 PMF1-BGLAPU3KQ54 211 aa12.98□□□□□ -0.33
ATG4B-213ENST00000460211 UNC119BA6NIH7 251 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 AHCYL1O43865 530 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 UBOX5O94941 541 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 PTHP01270 115 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 CD8AP01732 235 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 ATP6V1B2P21281 511 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 CDKN1AP38936 164 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 LIMS1P48059 325 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 GIPRP48546 466 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 ERVK-25P63136 954 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 TRAP1Q12931 704 aaKnown RBP12.97□□□□□ -0.33
ATG4B-213ENST00000460211 SEC23BQ15437 767 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 C10orf128Q5T292 105 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 GPR139Q6DWJ6 353 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 LINC00471Q8N535 108 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 NUP37Q8NFH4 326 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 NSMAFQ92636 917 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 CCDC124Q96CT7 223 aaKnown RBP12.97□□□□□ -0.33
ATG4B-213ENST00000460211 RSRC1Q96IZ7 334 aaKnown RBP12.97□□□□□ -0.33
ATG4B-213ENST00000460211 COX4I2Q96KJ9 171 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 Q96MF0 132 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 TSPAN32Q96QS1 320 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 KCNK17Q96T54 332 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 SH3GL3Q99963 347 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 BDH2Q9BUT1 245 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 SIAEQ9HAT2 523 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 CA10Q9NS85 328 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 SIGLEC7Q9Y286 467 aa12.97□□□□□ -0.33
ATG4B-213ENST00000460211 IGHV2OR16-5A0A0B4J2B6 119 aa12.96□□□□□ -0.33
ATG4B-213ENST00000460211 ZNF503-AS2A6NEH8 195 aa12.96□□□□□ -0.33
ATG4B-213ENST00000460211 PTP4A3O75365 173 aa12.96□□□□□ -0.33
ATG4B-213ENST00000460211 SLC2A10O95528 541 aa12.96□□□□□ -0.33
ATG4B-213ENST00000460211 SERPINA5P05154 406 aa12.96□□□□□ -0.33
ATG4B-213ENST00000460211 CELA3BP08861 270 aa12.96□□□□□ -0.33
ATG4B-213ENST00000460211 HOXB6P17509 224 aaKnown RBP12.96□□□□□ -0.33
ATG4B-213ENST00000460211 CALCRP30988 508 aa12.96□□□□□ -0.33
ATG4B-213ENST00000460211 SERPINF1P36955 418 aa12.96□□□□□ -0.33
ATG4B-213ENST00000460211 RPS6KA3P51812 740 aa12.96□□□□□ -0.33
ATG4B-213ENST00000460211 MRPS34P82930 218 aaKnown RBP12.96□□□□□ -0.33
ATG4B-213ENST00000460211 MS4A2Q01362 244 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms