RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PMS2P3Q13401 168 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 CAMK2DQ13557 499 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 SCARB2Q14108 478 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 OR1Q1Q15612 314 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 TRIP10Q15642 601 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 ALKBH6Q3KRA9 238 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 AGKQ53H12 422 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 ALG10BQ5I7T1 473 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 GCNT6Q5T4J0 391 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 FAM69AQ5T7M9 428 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 FAM166AQ6J272 317 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 NHLRC1Q6VVB1 395 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 CROCCP2Q86T23 111 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 LRP11Q86VZ4 500 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 RBM45Q8IUH3 476 aaKnown RBP4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 UEVLDQ8IX04 471 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 CDK20Q8IZL9 346 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 C10orf53Q8N6V4 93 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 LRRC17Q8N6Y2 441 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 SMYD1Q8NB12 490 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 FAM156AQ8NDB6 213 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 OR4F15Q8NGB8 312 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 FGFBP3Q8TAT2 258 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 MAGEE2Q8TD90 523 aaPredicted RBP4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC38A4Q969I6 547 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 TLCD1Q96CP7 247 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 SPDL1Q96EA4 605 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 BOD1Q96IK1 185 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 CLPTM1LQ96KA5 538 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 MOGAT1Q96PD6 335 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 LRRC37BQ96QE4 947 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 OR2M2Q96R28 347 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 SNX18Q96RF0 628 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 GPHA2Q96T91 129 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 KATNB1Q9BVA0 655 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 RAB1BQ9H0U4 201 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 TPK1Q9H3S4 243 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 NARFLQ9H6Q4 476 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 CACYBPQ9HB71 228 aaKnown RBP4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 TMEM27Q9HBJ8 222 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 A4GALTQ9NPC4 353 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 OBP2BQ9NPH6 170 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 TCF7L2Q9NQB0 619 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 B3GNT2Q9NY97 397 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 KCNS2Q9ULS6 477 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 DNHD1Q96M86 4753 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 SVEP1Q4LDE5 3571 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 TRAV36DV7A0A075B6V5 113 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 A0A0B4J2E0 115 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 A0A1B0GX12 115 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 C9orf118A6NHY6 69 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF726A6NNF4 738 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF99A8MXY4 864 aaPredicted RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 M0R3H8 397 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 NDUFS8O00217 210 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 PLPP3O14495 311 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 TRAF3IP2O43734 574 aaPredicted RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 OR2T1O43869 369 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF500O60304 480 aaPredicted RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 PEX14O75381 377 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 MFN2O95140 757 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 CH25HO95992 272 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 THY1P04216 161 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 AMY1AP04745 511 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 CSF3P09919 207 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 ADORA3P0DMS8 318 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 VSIG10L2P0DP72 767 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 RAP2AP10114 183 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 CCL2P13500 99 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF35P13682 527 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 B4GALT1P15291 398 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF23P17027 643 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 GPX2P18283 190 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 NR4A1P22736 598 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC6A2P23975 617 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 PRKAR1BP31321 381 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 ARR3P36575 388 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 ALDH3B1P43353 468 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 PTDSS1P48651 473 aaKnown RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 BIDP55957 195 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 RGS8P57771 180 aaPredicted RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 STX1BP61266 288 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 RAB1AP62820 205 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 POU3F1Q03052 451 aaPredicted RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 FADDQ13158 208 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 SNTB2Q13425 540 aaKnown RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 CCNIQ14094 377 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 DAG1Q14118 895 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 SELPLGQ14242 412 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 RAB39AQ14964 217 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 MFSD13AQ14CX5 517 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 MAD2L1BPQ15013 274 aaPredicted RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 EFNB3Q15768 340 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 DUSP7Q16829 419 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 ZSWIM7Q19AV6 140 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 RUNDC3AQ59EK9 446 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 BEND6Q5SZJ8 279 aaPredicted RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 LRIF1Q5T3J3 769 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 REEP3Q6NUK4 255 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 ULK3Q6PHR2 472 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms