RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ERI2A8K979 691 aaKnown RBP4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 FAM90A5PA8MXJ8 464 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 H3BUX3 64 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 TP73O15350 636 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 SYNGR1O43759 233 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 ZNF500O60304 480 aaPredicted RBP4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 PLOD3O60568 738 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 CLIC3O95833 236 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 IGHV3-13P01766 116 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 FAM90A15PP0C7V4 464 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 FAM90A14PP0C7W9 464 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 FAM228BP0C875 321 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 PRB4P10163 310 aaPredicted RBP4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 CSNK2A2P19784 350 aaPredicted RBP4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 PTMSP20962 102 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 RYKP34925 604 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 MDH2P40926 338 aaKnown RBP4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 CD226Q15762 336 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 NPTX1Q15818 432 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 FAM180BQ6P0A1 224 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 SLC48A1Q6P1K1 146 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 CBLN3Q6UW01 205 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 ZNF813Q6ZN06 617 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 RNF165Q6ZSG1 346 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 EGFL6Q8IUX8 553 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 DENND6AQ8IWF6 608 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 PDZD9Q8IXQ8 264 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 MLKLQ8NB16 471 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 OR7G3Q8NG95 312 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 B4GALNT2Q8NHY0 566 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 GPR119Q8TDV5 335 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 LINGO1Q96FE5 620 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 AURKBQ96GD4 344 aaPredicted RBP4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 SH3YL1Q96HL8 342 aaPredicted RBP4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 OR5B2Q96R09 309 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 BBS4Q96RK4 519 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 WACQ9BTA9 647 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 CDCA4Q9BXL8 241 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 NPFFR1Q9GZQ6 430 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 CCDC134Q9H6E4 229 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 RMND5AQ9H871 391 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 NANOGQ9H9S0 305 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 WDR41Q9HAD4 459 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 SLCO1C1Q9NYB5 712 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 KIF17Q9P2E2 1029 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 B3GAT1Q9P2W7 334 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 BAG5Q9UL15 447 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 OR10H1Q9Y4A9 318 aa4.14□□□□□ -1.75
SBDSP1-204ENST00000453858 NKX6-3A6NJ46 265 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 A8MZ25 164 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 SULT2B1O00204 365 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 PFDN6O15212 129 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 TAPBPO15533 448 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 ERAL1O75616 437 aaKnown RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 PSMG1O95456 288 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 OXSR1O95747 527 aaPredicted RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 GAS8O95995 478 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 MBPP02686 304 aaPredicted RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 ENO1P06733 434 aaKnown RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 LIPFP07098 398 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 CD55P08174 381 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 OR8G3PP0DMU2 310 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 VPS41P49754 854 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 RGS4P49798 205 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 CDKN2DP55273 166 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 KLF3P57682 345 aaPredicted RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 TAS2R39P59534 338 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 EIF3EP60228 445 aaKnown RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 RPS23P62266 143 aaKnown RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 CDKL1Q00532 357 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 IL5RAQ01344 420 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 KLHL30Q0D2K2 578 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 SF3A3Q12874 501 aaKnown RBP eCLIP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 NPRL3Q12980 569 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 SELENBP1Q13228 472 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 DECR1Q16698 335 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 TPD52L1Q16890 204 aaPredicted RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 IL23RQ5VWK5 629 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 WDR25Q64LD2 544 aaPredicted RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 SLC27A4Q6P1M0 643 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 PLBD1Q6P4A8 553 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 KCTD18Q6PI47 426 aaPredicted RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 ZNF788Q6ZQV5 615 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 UEVLDQ8IX04 471 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 ZBED8Q8IZ13 594 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 PNLDC1Q8NA58 520 aaKnown RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 GATSQ8NAP1 163 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 SCCPDHQ8NBX0 429 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 PIGXQ8TBF5 258 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 SYNPRQ8TBG9 265 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 BCAS4Q8TDM0 211 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 TSEN15Q8WW01 171 aaKnown RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 ITLN1Q8WWA0 313 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 GEMIN6Q8WXD5 167 aaKnown RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 NPIPB3Q92617 1050 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 ZNF764Q96H86 408 aaPredicted RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 PDLIM5Q96HC4 596 aaKnown RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 RITA1Q96K30 269 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 ZNF385AQ96PM9 386 aaKnown RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 OR5M11Q96RB7 305 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms