RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TTC4O95801 387 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 C8GP07360 202 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 CTAGE8P0CG41 777 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 CT45A8P0DMV1 189 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 CT45A9P0DMV2 189 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 C1GALT1C1LP0DN25 315 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 FASP25445 335 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 GTF2E2P29084 291 aaKnown RBP3.93□□□□□ -1.78
SDCBP-205ENST00000447267 KRT20P35900 424 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 CCT5P48643 541 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 SERPINB8P50452 374 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 PNLIPRP2P54317 469 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 UBE2NP61088 152 aaKnown RBP3.93□□□□□ -1.78
SDCBP-205ENST00000447267 TIAL1Q01085 375 aaKnown RBP eCLIP3.93□□□□□ -1.78
SDCBP-205ENST00000447267 TGFBR3Q03167 851 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 ZMYND11Q15326 602 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 PPP1R7Q15435 360 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 PARP6Q2NL67 630 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF260Q3ZCT1 412 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 TRMT12Q53H54 448 aaKnown RBP3.93□□□□□ -1.78
SDCBP-205ENST00000447267 CT45A2Q5DJT8 189 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 LRRC38Q5VT99 294 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 SIGIRRQ6IA17 410 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 CFAP161Q6P656 301 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 ZDHHC24Q6UX98 284 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 C3orf62Q6ZUJ4 267 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 GPR180Q86V85 440 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 THOC6Q86W42 341 aaKnown RBP3.93□□□□□ -1.78
SDCBP-205ENST00000447267 SLC44A2Q8IWA5 706 aaPredicted RBP3.93□□□□□ -1.78
SDCBP-205ENST00000447267 CTAGE4Q8IX94 777 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 IZUMO1Q8IYV9 350 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 OR8H2Q8N162 312 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 GPR137CQ8N3F9 429 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 SPICQ8N5J4 248 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 LSMEM1Q8N8F7 131 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 OR52R1Q8NGF1 315 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 MYDGFQ969H8 173 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 EGLN2Q96KS0 407 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 GPR21Q99679 349 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 FAM118BQ9BPY3 351 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 ERP44Q9BS26 406 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 TMEM79Q9BSE2 394 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 MS4A8Q9BY19 250 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 NDEL1Q9GZM8 345 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 ROGDIQ9GZN7 287 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 NT5DC2Q9H857 520 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 NANOGQ9H9S0 305 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 SAP30LQ9HAJ7 183 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 SMURF2Q9HAU4 748 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 SAYSD1Q9NPB0 183 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 KCNK9Q9NPC2 374 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 PFDN4Q9NQP4 134 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 CHRAC1Q9NRG0 131 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 IARS2Q9NSE4 1012 aaKnown RBP3.93□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF346Q9UL40 294 aaKnown RBP3.93□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF490Q9ULM2 529 aaPredicted RBP3.93□□□□□ -1.78
SDCBP-205ENST00000447267 SLC22A14Q9Y267 594 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 CFL2Q9Y281 166 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 TSSC4Q9Y5U2 329 aaPredicted RBP3.93□□□□□ -1.78
SDCBP-205ENST00000447267 LRP1BQ9NZR2 4599 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 ANKDD1BA6NHY2 528 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 CEACAM18A8MTB9 384 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 C16orf90A8MZG2 172 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 HNRNPCL2B2RXH8 293 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 H3BUX3 64 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 APOC4-APOC2K7ER74 178 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 P2RY10O00398 339 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 HDAC3O15379 428 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 SYNGR1O43759 233 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 CHST1O43916 411 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 TMPRSS11DO60235 418 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 HNRNPCL1O60812 293 aaKnown RBP3.92□□□□□ -1.78
SDCBP-205ENST00000447267 ANGPTL1O95841 491 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 LGI1O95970 557 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 APOC2P02655 101 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 MMP9P14780 707 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 CBR1P16152 277 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 PAX6P26367 422 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 NMBRP28336 390 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 PRKAR1BP31321 381 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 SSR2P43308 183 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 THBS3P49746 956 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 RAB25P57735 213 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 GLO1Q04760 184 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 TGM3Q08188 693 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 CHI3L2Q15782 390 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 PRICKLE4Q2TBC4 344 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 AP5B1Q2VPB7 878 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 IL23RQ5VWK5 629 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 RNLSQ5VYX0 342 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF774Q6NX45 483 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 DARS2Q6PI48 645 aaKnown RBP3.92□□□□□ -1.78
SDCBP-205ENST00000447267 C10orf99Q6UWK7 81 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 C16orf89Q6UX73 402 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 CASP12Q6UXS9 341 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 PPP1R21Q6ZMI0 780 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 C18orf65Q6ZTR6 163 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 BBS12Q6ZW61 710 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 LRRC28Q86X40 367 aaPredicted RBP3.92□□□□□ -1.78
SDCBP-205ENST00000447267 CADM3Q8N126 398 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms