RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 SMIM19Q96E16 107 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 ARL5BQ96KC2 179 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 MROQ9BYG7 248 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 A0A087WZY1 265 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 LIPT2A6NK58 231 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 SNPHO15079 494 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 UPK1BO75841 260 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 SFTPCP11686 197 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 EIF1P41567 113 aaKnown RBP13.51□□□□□ -0.25
SCAF11-204ENST00000395454 BLVRAP53004 296 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 PUDPQ08623 228 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 HNRNPA0Q13151 305 aaKnown RBP13.51□□□□□ -0.25
SCAF11-204ENST00000395454 ZNF239Q16600 458 aaKnown RBP13.51□□□□□ -0.25
SCAF11-204ENST00000395454 PLEKHN1Q494U1 663 aaPredicted RBP13.51□□□□□ -0.25
SCAF11-204ENST00000395454 TIGD3Q6B0B8 471 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 RPL22L1Q6P5R6 122 aaKnown RBP13.51□□□□□ -0.25
SCAF11-204ENST00000395454 DCDC5Q6ZRR9 648 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 KCTD20Q7Z5Y7 419 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 PLCZ1Q86YW0 608 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 PARP16Q8N5Y8 322 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 OR4K17Q8NGC6 315 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 AP3S1Q92572 193 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 TSSK2Q96PF2 358 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 SYT4Q9H2B2 425 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 ZFP64Q9NPA5 681 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 ALKBH4Q9NXW9 302 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 FBXL2Q9UKC9 423 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 VDAC3Q9Y277 283 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 TRAPPC4Q9Y296 219 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 B3GALT5Q9Y2C3 310 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 ISPDA4D126 451 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 MS4A18H0YCH9 400 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 XKRYO14609 159 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 CLEC2LP0C7M8 214 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 IMPDH2P12268 514 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 TNFSF8P32971 234 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 HCCSP53701 268 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 SIRPAP78324 504 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 PMP22Q01453 160 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 PLGLB1Q02325 96 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 FOXO1Q12778 655 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 MRPL28Q13084 256 aaKnown RBP13.51□□□□□ -0.25
SCAF11-204ENST00000395454 OXA1LQ15070 435 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 TOMM20Q15388 145 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 ZNF181Q2M3W8 571 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 MS4A18Q3C1V0 323 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 TP53I3Q53FA7 332 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 SPANXN2Q5MJ10 180 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 FAM205BPQ63HN1 556 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 C3orf33Q6P1S2 294 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 ARL9Q6T311 187 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 LYPD4Q6UWN0 246 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 NHLRC1Q6VVB1 395 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 H1FNTQ75WM6 255 aaPredicted RBP13.51□□□□□ -0.25
SCAF11-204ENST00000395454 TRILQ7L0X0 811 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 MINDY2Q8NBR6 621 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 SLC25A43Q8WUT9 341 aaPredicted RBP13.51□□□□□ -0.25
SCAF11-204ENST00000395454 PNPLA2Q96AD5 504 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 ZBTB8AQ96BR9 441 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 SLC30A2Q9BRI3 323 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 TTTY12Q9BZ98 90 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 CHST11Q9NPF2 352 aa13.51□□□□□ -0.25
SCAF11-204ENST00000395454 FREM3P0C091 2139 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 IGLV1-36A0A0B4J1U3 117 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 LRRC3CA6NJW4 275 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 HSPB2A8KAH6 182 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 SERPINI2O75830 405 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 OR6A2O95222 327 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 ABHD16AO95870 558 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 GBX2P52951 348 aaPredicted RBP13.5□□□□□ -0.25
SCAF11-204ENST00000395454 MXD1Q05195 221 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 INSL4Q14641 139 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 HSPB2Q16082 182 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 GHDCQ8N2G8 530 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 ZNF511Q8NB15 262 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 ZFP62Q8NB50 900 aaPredicted RBP13.5□□□□□ -0.25
SCAF11-204ENST00000395454 SNX33Q8WV41 574 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 KCNS3Q9BQ31 491 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 PTGES2Q9H7Z7 377 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 LHX6Q9UPM6 363 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 V9GYH0 126 aa13.5□□□□□ -0.25
SCAF11-204ENST00000395454 SLC22A23A1A5C7 686 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 A6NIZ1 184 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 CD8B2A6NJW9 211 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 FAM166BA8MTA8 275 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 PRR32B1ATL7 298 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 C11orf98E9PRG8 122 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 LOC110117498-PIK3R3F6TDL0 507 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 ARHGEF9O43307 516 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 GPRIN2O60269 458 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 RFPL3SP0C7P2 107 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 CD8BP10966 210 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 IL11P20809 199 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 ACVR1BP36896 505 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 DAP3P51398 398 aaKnown RBP13.49□□□□□ -0.25
SCAF11-204ENST00000395454 RAP1BP61224 184 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 RAP1AP62834 184 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 SELENBP1Q13228 472 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 PCSK4Q6UW60 755 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 RPTNQ6XPR3 784 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms