RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 WDR76Q9H967 626 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 SFXN1Q9H9B4 322 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 GON4LQ3T8J9 2241 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 FITM1A5D6W6 292 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 C1QTNF3-AMACRE9PGA6 284 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 CDC40O60508 579 aaKnown RBP eCLIP13.33□□□□□ -0.28
COL6A2-202ENST00000310645 OR2F2O95006 317 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 ITGB2P05107 769 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 RFC3P40938 356 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 TSFMP43897 325 aaKnown RBP13.33□□□□□ -0.28
COL6A2-202ENST00000310645 CTXN1P60606 82 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 OR2F1Q13607 317 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 RAB11BQ15907 218 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 FBXO42Q6P3S6 717 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 ACOT7LQ6ZUV0 252 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 CAMKVQ8NCB2 501 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 OR1M1Q8NGA1 313 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 OR5M8Q8NGP6 311 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 MBD2Q9UBB5 411 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 FAM96BQ9Y3D0 163 aa13.33□□□□□ -0.28
COL6A2-202ENST00000310645 LINC00587B1AMM8 73 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 CYB5AP00167 134 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 CASRP41180 1078 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 DEFB115Q30KQ5 88 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 ZNF528Q3MIS6 628 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 SLC35D2Q76EJ3 337 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 OR10R2Q8NGX6 335 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 WFIKKN2Q8TEU8 576 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 PHPT1Q9NRX4 125 aaPredicted RBP13.32□□□□□ -0.28
COL6A2-202ENST00000310645 OR4C45A6NMZ5 311 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 SGCEO43556 437 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 OR10H2O60403 315 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 SRPX2O60687 465 aaPredicted RBP13.32□□□□□ -0.28
COL6A2-202ENST00000310645 CTSVO60911 334 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 HLA-DQA2P01906 255 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 RORAP35398 523 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 TAS2R19P59542 299 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 SQSTM1Q13501 440 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 FHL5Q5TD97 284 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 DGAT2L6Q6ZPD8 337 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 SFT2D1Q8WV19 159 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 TMED6Q8WW62 240 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 STARD5Q9NSY2 213 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 CGGBP1Q9UFW8 167 aaPredicted RBP13.32□□□□□ -0.28
COL6A2-202ENST00000310645 SLC22A13Q9Y226 551 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 EML5Q05BV3 1969 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 TRAV20A0A0B4J274 112 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 A0A0B4J2A0 478 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 DCDC2BA2VCK2 349 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 C5orf51A6NDU8 294 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 APEHP13798 732 aaKnown RBP13.32□□□□□ -0.28
COL6A2-202ENST00000310645 ACTBP60709 375 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 ACTG1P63261 375 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 SLC35D3Q5M8T2 416 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 ZNF684Q5T5D7 378 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 SLC16A9Q7RTY1 509 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 RXFP4Q8TDU9 374 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 SEH1LQ96EE3 360 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 SERINC2Q96SA4 455 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 ZNF426Q9BUY5 554 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 SERGEFQ9UGK8 458 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 SHPKQ9UHJ6 478 aa13.32□□□□□ -0.28
COL6A2-202ENST00000310645 ZNF736B4DX44 427 aaPredicted RBP13.31□□□□□ -0.28
COL6A2-202ENST00000310645 IGKV1D-16P01601 117 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 CXCL10P02778 98 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 CEBPBP17676 345 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 SNRPEP62304 92 aaKnown RBP13.31□□□□□ -0.28
COL6A2-202ENST00000310645 RBM39Q14498 530 aaKnown RBP13.31□□□□□ -0.28
COL6A2-202ENST00000310645 OR1J4Q8NGS1 313 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 RSPH9Q9H1X1 276 aaPredicted RBP13.31□□□□□ -0.28
COL6A2-202ENST00000310645 MSRAQ9UJ68 235 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 FBXL21Q9UKT6 434 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 SLC22A7Q9Y694 548 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 CPED1A4D0V7 1026 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 OR2T1O43869 369 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 EIF3GO75821 320 aaKnown RBP eCLIP13.31□□□□□ -0.28
COL6A2-202ENST00000310645 EML2O95834 649 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 ADH1CP00326 375 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 RBM34P42696 430 aaKnown RBP13.31□□□□□ -0.28
COL6A2-202ENST00000310645 AVPI1Q5T686 147 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 DNM1P46Q6ZS02 220 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 FAM219AQ8IW50 185 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 TRIM43Q96BQ3 446 aaPredicted RBP13.31□□□□□ -0.28
COL6A2-202ENST00000310645 CNTNAP3BQ96NU0 1288 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 AMELYQ99218 206 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 ELF4Q99607 663 aaPredicted RBP13.31□□□□□ -0.28
COL6A2-202ENST00000310645 SLC6A7Q99884 636 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 SELENOIQ9C0D9 397 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 SRMSQ9H3Y6 488 aa13.31□□□□□ -0.28
COL6A2-202ENST00000310645 TRBV5-5A0A0J9YX44 114 aa13.3□□□□□ -0.28
COL6A2-202ENST00000310645 TMEM235A6NFC5 223 aa13.3□□□□□ -0.28
COL6A2-202ENST00000310645 TO15178 435 aa13.3□□□□□ -0.28
COL6A2-202ENST00000310645 PVRP15151 417 aa13.3□□□□□ -0.28
COL6A2-202ENST00000310645 PGAM2P15259 253 aa13.3□□□□□ -0.28
COL6A2-202ENST00000310645 AKR1C4P17516 323 aa13.3□□□□□ -0.28
COL6A2-202ENST00000310645 MAP3K8P41279 467 aa13.3□□□□□ -0.28
COL6A2-202ENST00000310645 GRK6P43250 576 aa13.3□□□□□ -0.28
COL6A2-202ENST00000310645 RPS15AP62244 130 aaKnown RBP13.3□□□□□ -0.28
COL6A2-202ENST00000310645 CXADRP78310 365 aa13.3□□□□□ -0.28
COL6A2-202ENST00000310645 ADAM8P78325 824 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms