RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 SEMA6DQ8NFY4 1073 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 C17orf50Q8WW18 174 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 SDF2Q99470 211 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 GPR173Q9NS66 373 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 GLTPQ9NZD2 209 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 GON4LQ3T8J9 2241 aa15.86■□□□□ 0.13
SHANK1-201ENST00000293441 GFYI3L273 518 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 MYBPHQ13203 477 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 SLC35D3Q5M8T2 416 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 ATPAF1Q5TC12 328 aaPredicted RBP15.85■□□□□ 0.13
SHANK1-201ENST00000293441 SPRED1Q7Z699 444 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 IGHV3-64DA0A0J9YX35 117 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 QDPRP09417 244 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 GFERP55789 205 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 FAPQ12884 760 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 CA13Q8N1Q1 262 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 RNF170Q96K19 258 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 TJP1Q07157 1748 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 IGLV3-27P01718 113 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 TMEM196Q5HYL7 178 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 NAXDQ8IW45 347 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 TIMD4Q96H15 378 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 DUSP22Q9NRW4 184 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 UFSP2Q9NUQ7 469 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 K7EPK0 472 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 TNFSF11O14788 317 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 MED6O75586 246 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 GDNFP39905 211 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 CAPZBP47756 277 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 ZNF767PQ75MW2 155 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 WFDC8Q8IUA0 241 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 FAM71E2Q8N5Q1 922 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 CPNE4Q96A23 557 aaPredicted RBP15.85■□□□□ 0.13
SHANK1-201ENST00000293441 BARHL1Q9BZE3 327 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 C19orf53Q9UNZ5 99 aaPredicted RBP15.85■□□□□ 0.13
SHANK1-201ENST00000293441 GABARAPH6UMI1 98 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 PHF1O43189 567 aaPredicted RBP15.85■□□□□ 0.13
SHANK1-201ENST00000293441 GABARAPO95166 117 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 PRKACAP17612 351 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 MCCD1P59942 119 aaPredicted RBP15.85■□□□□ 0.13
SHANK1-201ENST00000293441 YIF1BQ5BJH7 314 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 SLC22A25Q6T423 547 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 DVL3Q92997 716 aaPredicted RBP15.85■□□□□ 0.13
SHANK1-201ENST00000293441 NAA50Q9GZZ1 169 aaKnown RBP15.85■□□□□ 0.13
SHANK1-201ENST00000293441 UBQLN3Q9H347 655 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 PROCRQ9UNN8 238 aa15.85■□□□□ 0.13
SHANK1-201ENST00000293441 TRGV8A0A0C4DH27 118 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 HMGN4O00479 90 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 OR2J2O76002 312 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 GLULP15104 373 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 MMP11P24347 488 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 GLIPR1L1Q6UWM5 242 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 WDR5BQ86VZ2 330 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 SPEM1Q8N4L4 309 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.84■□□□□ 0.13
SHANK1-201ENST00000293441 CD300AQ9UGN4 299 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 DIMT1Q9UNQ2 313 aaKnown RBP15.84■□□□□ 0.13
SHANK1-201ENST00000293441 C17orf112F2Z3M2 114 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 CNIH1O95406 144 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 CD22P20273 847 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 CPT2P23786 658 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 OGFOD3Q6PK18 319 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 PELI3Q8N2H9 469 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 LTB4R2Q9NPC1 389 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 NAGAP17050 411 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 Q6ZS52 159 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 SSC5DA1L4H1 1573 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 ZC3H12DA2A288 527 aaKnown RBP15.84■□□□□ 0.13
SHANK1-201ENST00000293441 H0YIG0 161 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 SSX4O60224 188 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 LGI1O95970 557 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 RAB11AP62491 216 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 RPL11P62913 178 aaKnown RBP15.84■□□□□ 0.13
SHANK1-201ENST00000293441 MORN4Q8NDC4 146 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 GATA6Q92908 595 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 IP6K3Q96PC2 410 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 CRLF2Q9HC73 371 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 PRELID3BQ9Y3B1 194 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 A0A096LPE4 126 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 A0A1W2PPZ6 126 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 SSX2Q16385 188 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 TATDN3Q17R31 274 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 ADPRMQ3LIE5 342 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 ZNF468Q5VIY5 522 aaPredicted RBP15.84■□□□□ 0.13
SHANK1-201ENST00000293441 RTL8AQ9BWD3 113 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 SAV1Q9H4B6 383 aaPredicted RBP15.84■□□□□ 0.13
SHANK1-201ENST00000293441 GUSBP08236 651 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 ZGLP1P0C6A0 271 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 TAS2R30P59541 319 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 PEA15Q15121 130 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 SEC22AQ96IW7 307 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 CENPOQ9BU64 300 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 CGGBP1Q9UFW8 167 aaPredicted RBP15.84■□□□□ 0.13
SHANK1-201ENST00000293441 PRELID1Q9Y255 219 aa15.84■□□□□ 0.13
SHANK1-201ENST00000293441 HSBP1L1C9JCN9 74 aa15.83■□□□□ 0.13
SHANK1-201ENST00000293441 M0QYG6 137 aa15.83■□□□□ 0.13
SHANK1-201ENST00000293441 MTNR1BP49286 362 aa15.83■□□□□ 0.13
SHANK1-201ENST00000293441 PMPCAQ10713 525 aa15.83■□□□□ 0.13
SHANK1-201ENST00000293441 AGBL4Q5VU57 503 aa15.83■□□□□ 0.13
SHANK1-201ENST00000293441 LPCAT3Q6P1A2 487 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms