RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Dppa5aQ9CQS7 118 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Mpig6bD7PDD4 242 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Vmn2r16E9Q025 850 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Ms4a7E9Q9V5 267 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Vmn2r69G3XA45 850 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Alx4O35137 399 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Nat1P50294 290 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Gabrb1P50571 474 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Ctf2P83714 204 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Kcnj8P97794 424 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Col9a1Q05722 921 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 CiartQ3TQ03 375 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Hsh2dQ6VYH9 334 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Impad1Q80V26 356 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Ddhd2Q80Y98 699 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Ptbp3Q8BHD7 523 aaKnown RBP13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Fbxo45Q8K3B1 286 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Pom121Q8K3Z9 1200 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr788Q8VFI0 311 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Itgb3bpQ9CQ82 176 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Vkorc1Q9CRC0 161 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Arl5bQ9D4P0 179 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 1700034I23RikQ9D9Q3 184 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Spint2Q9WU03 252 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Celsr1O35161 3034 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Hist1h2abC0HKE1 130 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Hist1h2acC0HKE2 130 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Hist1h2adC0HKE3 130 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Hist1h2aeC0HKE4 130 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Hist1h2agC0HKE5 130 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Hist1h2aiC0HKE6 130 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Hist1h2anC0HKE7 130 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Hist1h2aoC0HKE8 130 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Hist1h2apC0HKE9 130 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Gm21319F6YNI8 144 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Vmn2r89O35199 507 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Klk1b5P15945 261 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 CdaP56389 146 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Agbl5Q09M02 886 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 C1rlQ3UZ09 482 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Nptx1Q62443 432 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Sidt1Q6AXF6 827 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 BC061237Q6P8I2 184 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Rps27Q6ZWU9 84 aaKnown RBP13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Hyal5Q812F3 526 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Hist3h2aQ8BFU2 130 aaKnown RBP13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Wdr48Q8BH57 676 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Hist1h2afQ8CGP5 130 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Hist1h2ahQ8CGP6 128 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Hist1h2akQ8CGP7 130 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Slc22a22Q8R0S9 554 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Polr2hQ923G2 150 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Tex13bQ99MW5 186 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Krt88Q9CPR6 171 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Bcl2l14Q9CPT0 328 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Cdc40Q9DC48 579 aaKnown RBP13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Tor1aQ9ER39 333 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Tbl2Q9R099 442 aaKnown RBP13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Znf346Q9R0B7 294 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Zfhx4Q9JJN2 3550 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Trbv2A0A0B4J1G8 114 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Rhox2fA2ANE0 191 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Gm13102A2ASJ3 519 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr1193A2AV13 318 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Gm45062E0CZ38 131 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Prl8a2O54832 240 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Cops3O88543 423 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Efnb1P52795 345 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Cep44Q5HZK1 386 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr332Q5NC45 344 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 CfiQ61129 603 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Cd47Q61735 303 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 SrmsQ62270 496 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Cyb561a3Q6P1H1 242 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Zfp866Q6PGD2 520 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Pum1Q80U78 1189 aaKnown RBP13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Jazf1Q80ZQ5 243 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Flywch1Q8CI03 673 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Ccdc92Q8VDN4 314 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 PnpoQ91XF0 261 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Slc41a3Q921R8 488 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Bhlhe41Q99PV5 410 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Dimt1Q9D0D4 313 aaKnown RBP13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Plxdc2Q9DC11 530 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Scamp2Q9ERN0 329 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Gpc6Q9R087 555 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 Pkd1l3Q2EG98 2201 aa13.38□□□□□ -0.27
Nup88-202ENSMUST00000108530 PrnA0A075B668 197 aa13.37□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr740E9PV79 311 aa13.37□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr655E9Q252 308 aa13.37□□□□□ -0.27
Nup88-202ENSMUST00000108530 Adamts3E9Q287 1204 aa13.37□□□□□ -0.27
Nup88-202ENSMUST00000108530 Gm8871F7AXK2 190 aa13.37□□□□□ -0.27
Nup88-202ENSMUST00000108530 Stfa3P35173 103 aa13.37□□□□□ -0.27
Nup88-202ENSMUST00000108530 Cab39Q06138 341 aa13.37□□□□□ -0.27
Nup88-202ENSMUST00000108530 Tie1Q06806 1134 aa13.37□□□□□ -0.27
Nup88-202ENSMUST00000108530 Secisbp2Q3U1C4 858 aaKnown RBP13.37□□□□□ -0.27
Nup88-202ENSMUST00000108530 Klhl21Q3U410 597 aa13.37□□□□□ -0.27
Nup88-202ENSMUST00000108530 Fbxo7Q3U7U3 523 aa13.37□□□□□ -0.27
Nup88-202ENSMUST00000108530 Bahd1Q497V6 772 aa13.37□□□□□ -0.27
Nup88-202ENSMUST00000108530 Acvr1bQ61271 505 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms