RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 ARG2P78540 354 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 GK2Q14410 553 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-219ENST00000556413 MESDQ14696 234 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 STX1AQ16623 288 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 CCSMST1Q4G0I0 132 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 CT45A2Q5DJT8 189 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 CCDC122Q5T0U0 273 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 OTPQ5XKR4 325 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 RHBDD2Q6NTF9 364 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 STEAP1BQ6NZ63 245 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 KDELC1Q6UW63 502 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 ADAMTSL5Q6ZMM2 481 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 LANCL3Q6ZV70 420 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 ARCQ7LC44 396 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 TAS2R42Q7RTR8 314 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 AMZ2Q86W34 360 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 RAB43Q86YS6 212 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 KRT222Q8N1A0 295 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 BBS5Q8N3I7 341 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 CLDN19Q8N6F1 224 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 C14orf178Q8N769 122 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-219ENST00000556413 OR13F1Q8NGS4 319 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 FBXO25Q8TCJ0 367 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 RNASE8Q8TDE3 154 aaKnown RBP2.13□□□□□ -2.07
SCFD1-219ENST00000556413 LCN9Q8WX39 176 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 N4BP2L2Q92802 583 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-219ENST00000556413 C16orf74Q96GX8 76 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 DNAJC1Q96KC8 554 aaKnown RBP2.13□□□□□ -2.07
SCFD1-219ENST00000556413 TTC25Q96NG3 672 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 TIMM29Q9BSF4 260 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 TMEM121Q9BTD3 319 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 UCK2Q9BZX2 261 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 SLC26A1Q9H2B4 701 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 SRMSQ9H3Y6 488 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 COG4Q9H9E3 785 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 RNPEPL1Q9HAU8 725 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 GRPEL1Q9HAV7 217 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 IL26Q9NPH9 171 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 DDX28Q9NUL7 540 aaKnown RBP2.13□□□□□ -2.07
SCFD1-219ENST00000556413 PARVAQ9NVD7 372 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 IMPAD1Q9NX62 359 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 CRLS1Q9UJA2 301 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 MRTO4Q9UKD2 239 aaKnown RBP2.13□□□□□ -2.07
SCFD1-219ENST00000556413 DIMT1Q9UNQ2 313 aaKnown RBP2.13□□□□□ -2.07
SCFD1-219ENST00000556413 MRPS2Q9Y399 296 aaKnown RBP2.13□□□□□ -2.07
SCFD1-219ENST00000556413 LRBAP50851 2863 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 SHANK1Q9Y566 2161 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 UNC13CQ8NB66 2214 aa2.13□□□□□ -2.07
SCFD1-219ENST00000556413 CACNA1DQ01668 2161 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 A0A0J9YVX5 310 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 C13orf42A0A1B0GVH6 325 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 SMIM30A4D0T7 59 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 A8MUI8 341 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 B4DXG7 233 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 NPIPA5E9PKD4 350 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 G3V3Y1 287 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 OR1I1O60431 355 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 KLF7O75840 302 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-219ENST00000556413 MT-ND3P03897 115 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 KLK3P07288 261 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-219ENST00000556413 TPM2P07951 284 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 ZNF30P17039 623 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 DESP17661 470 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 VCLP18206 1134 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 KDELR1P24390 212 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 TEAD1P28347 426 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 IL2RGP31785 369 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 HSPA9P38646 679 aaKnown RBP2.12□□□□□ -2.07
SCFD1-219ENST00000556413 GABRA4P48169 554 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 P2RY4P51582 365 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 RPS4XP62701 263 aaKnown RBP2.12□□□□□ -2.07
SCFD1-219ENST00000556413 MYL5Q02045 173 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 TLE4Q04727 773 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 ZNF33BQ06732 778 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 PPIDQ08752 370 aaKnown RBP2.12□□□□□ -2.07
SCFD1-219ENST00000556413 WASHC5Q12768 1159 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 POU6F1Q14863 301 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 SLC10A1Q14973 349 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 PAFAH1B3Q15102 231 aaKnown RBP2.12□□□□□ -2.07
SCFD1-219ENST00000556413 RPS6KA1Q15418 735 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 CLPPQ16740 277 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-219ENST00000556413 HKDC1Q2TB90 917 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 FRMPD2BQ6IN97 320 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 CNSTQ6PJW8 725 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 SPESP1Q6UW49 350 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 MFSD7Q6UXD7 560 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 C16orf47Q6ZP98 133 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-219ENST00000556413 Q6ZS92 163 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 PRSS41Q7RTY9 318 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 PIWIL3Q7Z3Z3 882 aaKnown RBP2.12□□□□□ -2.07
SCFD1-219ENST00000556413 LUZP1Q86V48 1076 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 SERPINA9Q86WD7 417 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 STHQ8IWL8 128 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 PIANPQ8IYJ0 282 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 ZNF567Q8N184 647 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 KIF2BQ8N4N8 673 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 ZADH2Q8N4Q0 377 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 LINC01555Q8NAE3 123 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 ST6GALNAC3Q8NDV1 305 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 OR4K2Q8NGD2 314 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms