RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 SMARCD3Q6STE5 483 aa16.55■□□□□ 0.24
MRPL54-201ENST00000330133 TUBA1AQ71U36 451 aa16.55■□□□□ 0.24
MRPL54-201ENST00000330133 ZNF627Q7L945 461 aa16.55■□□□□ 0.24
MRPL54-201ENST00000330133 PIAS4Q8N2W9 510 aaPredicted RBP16.55■□□□□ 0.24
MRPL54-201ENST00000330133 ARIH2OSQ8N7S6 290 aa16.55■□□□□ 0.24
MRPL54-201ENST00000330133 OR4C15Q8NGM1 316 aa16.55■□□□□ 0.24
MRPL54-201ENST00000330133 FNDC8Q8TC99 324 aa16.55■□□□□ 0.24
MRPL54-201ENST00000330133 NANOS1Q8WY41 292 aaKnown RBP16.55■□□□□ 0.24
MRPL54-201ENST00000330133 AKAP1Q92667 903 aaKnown RBP eCLIP16.55■□□□□ 0.24
MRPL54-201ENST00000330133 KCNK17Q96T54 332 aa16.55■□□□□ 0.24
MRPL54-201ENST00000330133 ITGB1BP2Q9UKP3 347 aa16.55■□□□□ 0.24
MRPL54-201ENST00000330133 ABCA12Q86UK0 2595 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 EBAG9O00559 213 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 XKRYO14609 159 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 HS3ST1O14792 307 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 ARHGEF9O43307 516 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 B4GALT1P15291 398 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 CBR1P16152 277 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 GSSP48637 474 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 TSPAN31Q12999 210 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 THEM4Q5T1C6 240 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 GPR139Q6DWJ6 353 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 ADAM5Q6NVV9 412 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 PGBD2Q6P3X8 592 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 DPY19L2P2Q6ZN68 376 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 C20orf204Q6ZNR8 217 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 FAM169BQ8N8A8 192 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 ZNF519Q8TB69 540 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 FANK1Q8TC84 345 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 ZNF570Q96NI8 536 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 SLC38A2Q96QD8 506 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 KCNS3Q9BQ31 491 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 CCM2LQ9NUG4 571 aaPredicted RBP16.54■□□□□ 0.24
MRPL54-201ENST00000330133 U3KQV3 271 aa16.54■□□□□ 0.24
MRPL54-201ENST00000330133 CIB2O75838 187 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 FARS2O95363 451 aaKnown RBP16.53■□□□□ 0.24
MRPL54-201ENST00000330133 OR8G3PP0DMU2 310 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 CD79AP11912 226 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 SLC6A6P31641 620 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 RPS6KA3P51812 740 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 ZNF133P52736 654 aaPredicted RBP16.53■□□□□ 0.24
MRPL54-201ENST00000330133 IST1P53990 364 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 PPP1R8Q12972 351 aaKnown RBP16.53■□□□□ 0.24
MRPL54-201ENST00000330133 GK3PQ14409 553 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 MICAQ29983 383 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 RFX4Q33E94 735 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 C3orf36Q3SXR2 165 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 ZNF672Q499Z4 452 aaPredicted RBP16.53■□□□□ 0.24
MRPL54-201ENST00000330133 SLC22A25Q6T423 547 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 THSD4Q6ZMP0 1018 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 KBTBD8Q8NFY9 601 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 OR9Q2Q8NGE9 314 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 Q96M85 177 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 GPX7Q96SL4 187 aaPredicted RBP16.53■□□□□ 0.24
MRPL54-201ENST00000330133 SMURF2Q9HAU4 748 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 TMEM38BQ9NVV0 291 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 VNN3Q9NY84 501 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 CRNNQ9UBG3 495 aaPredicted RBP16.53■□□□□ 0.24
MRPL54-201ENST00000330133 IL20RAQ9UHF4 553 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 ADAM18Q9Y3Q7 739 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 IER3IP1Q9Y5U9 82 aa16.53■□□□□ 0.24
MRPL54-201ENST00000330133 FKBP6O75344 327 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 ATE1O95260 518 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 HLA-HP01893 362 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 ARR3P36575 388 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 ERFP50548 548 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 CDH11P55287 796 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 C10orf128Q5T292 105 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 C1orf146Q5VVC0 180 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 MDP1Q86V88 176 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 SLC22A24Q8N4F4 322 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 ZNF611Q8N823 705 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 LILRB1Q8NHL6 650 aaPredicted RBP16.52■□□□□ 0.24
MRPL54-201ENST00000330133 NSMAFQ92636 917 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 NEUROG1Q92886 237 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 FBXW5Q969U6 566 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 OR52D1Q9H346 318 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 NRIP3Q9NQ35 241 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 POU2F3Q9UKI9 436 aa16.52■□□□□ 0.24
MRPL54-201ENST00000330133 IGHV1-18A0A0C4DH31 117 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 TEX13CA0A0J9YWL9 993 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 SHISA9B4DS77 424 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 AHCYL1O43865 530 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 MGRN1O60291 552 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 UBL3O95164 117 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 SLC2A10O95528 541 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 GASTP01350 101 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 CD53P19397 219 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 SDHAP31040 664 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 GUCA1AP43080 201 aaPredicted RBP16.51■□□□□ 0.23
MRPL54-201ENST00000330133 FXYD6P3P58550 94 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 PIGFQ07326 219 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 KRR1Q13601 381 aaKnown RBP16.51■□□□□ 0.23
MRPL54-201ENST00000330133 GSG1Q2KHT4 349 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 SLC25A47Q6Q0C1 308 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 FAM122BQ7Z309 247 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 SKA3Q8IX90 412 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 AQP11Q8NBQ7 271 aa16.51■□□□□ 0.23
MRPL54-201ENST00000330133 PAPD5Q8NDF8 572 aaKnown RBP16.51■□□□□ 0.23
MRPL54-201ENST00000330133 PIGTQ969N2 578 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms