RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 EMC6Q9BV81 110 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 POMT2Q9UKY4 750 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 C19orf53Q9UNZ5 99 aaPredicted RBP6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 SH2D7A6NKC9 451 aaPredicted RBP6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 M0R082 166 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 FGF17O60258 216 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 MED6O75586 246 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 CDK1P06493 297 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 LIPCP11150 499 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 TBXA2RP21731 343 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 ALDH3B2P48448 385 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 SRP9P49458 86 aaKnown RBP6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 FOXK2Q01167 660 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 ARHGAP11BQ3KRB8 267 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 CLVS2Q5SYC1 327 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 RGS7BPQ6MZT1 257 aaPredicted RBP6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 OVCH1Q7RTY7 1134 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 ZNF679Q8IYX0 411 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 CMTM4Q8IZR5 234 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 SLC22A24Q8N4F4 322 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 OR4M1Q8NGD0 313 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 SLC39A7Q92504 469 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 IL21Q9HBE4 155 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 CNOT2Q9NZN8 540 aaKnown RBP6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 PCDHGA5Q9Y5G8 931 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 SOCS6O14544 535 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 GAPDHSO14556 408 aaPredicted RBP6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 SH2D1BO14796 132 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 GPRIN2O60269 458 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 PIP5K1CO60331 668 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 IGLV3-27P01718 113 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 SFTPCP11686 197 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 CLN3Q13286 438 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 SELPLGQ14242 412 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 ALKBH6Q3KRA9 238 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 COX20Q5RI15 118 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 ZNF468Q5VIY5 522 aaPredicted RBP6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 METTL11BQ5VVY1 283 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 FRMPD2BQ6IN97 320 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 VASH2Q86V25 355 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 WDR5BQ86VZ2 330 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 GDPD1Q8N9F7 314 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 OR52N5Q8NH56 324 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 ZFP90Q8TF47 636 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 NMNAT2Q9BZQ4 307 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 DUSP22Q9NRW4 184 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 POLDIP2Q9Y2S7 368 aa6.35□□□□□ -1.39
GAPVD1-202ENST00000297933 IGHV1OR15-9A0A0B4J2B8 117 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 TSPAN15O95858 294 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 FABP1P07148 127 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 DHRS4L1P0CG22 281 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 MEOX1P50221 254 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 RNF4P78317 190 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 TCTN3Q6NUS6 607 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 SYT9Q86SS6 491 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 NOXA1Q86UR1 476 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 EGFL6Q8IUX8 553 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 UTP4Q969X6 686 aaKnown RBP6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 TMIGD2Q96BF3 282 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 FAM122AQ96E09 287 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 LYSMD1Q96S90 227 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 RPP25Q9BUL9 199 aaKnown RBP6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 ABHD6Q9BV23 337 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 LHPPQ9H008 270 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 PTTG3PQ9NZH4 202 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 SLC17A4Q9Y2C5 497 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 NUBP2Q9Y5Y2 271 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 GOLGA4Q13439 2230 aaKnown RBP6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 SLC22A23A1A5C7 686 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 TSPAN11A1L157 253 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 HSD17B6O14756 317 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 P2RX6O15547 441 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 POU2F2P09086 479 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 ALDOCP09972 364 aaKnown RBP6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 NR4A2P43354 598 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 MAP2K6P52564 334 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 SRSF5Q13243 272 aaKnown RBP6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 FAM53BQ14153 422 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 LEXMQ3ZCV2 418 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 METAP1DQ6UB28 335 aaPredicted RBP6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 GTPBP8Q8N3Z3 284 aaPredicted RBP6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 OR2V1Q8NHB1 315 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 SUN5Q8TC36 379 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 ST8SIA1Q92185 356 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 OXGR1Q96P68 337 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 C7orf50Q9BRJ6 194 aaKnown RBP6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 CRISPLD2Q9H0B8 497 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 PPA2Q9H2U2 334 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 NLKQ9UBE8 527 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 MICAL3Q7RTP6 2002 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 RAB40ALP0C0E4 278 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 SLC2A1P11166 492 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 GIPRP48546 466 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 SUB1P53999 127 aaKnown RBP eCLIP6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 MS4A2Q01362 244 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 SSPNQ14714 243 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 MEP1BQ16820 701 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 SLC35D3Q5M8T2 416 aa6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.34□□□□□ -1.39
GAPVD1-202ENST00000297933 FAM71CQ8NEG0 241 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms