RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SUMF1Q8NBK3 374 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 OR2T11Q8NH01 316 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 IER2Q9BTL4 223 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 CXorf36Q9H7Y0 433 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 FADS1O60427 444 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 ELAVL4P26378 380 aaKnown RBP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 EMX1Q04741 257 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 PRTGQ2VWP7 1150 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 FRMPD2BQ6IN97 320 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 H2BFWTQ7Z2G1 175 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 FAM109AQ8N4B1 249 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 OR10J5Q8NHC4 309 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 SLC37A2Q8TED4 501 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 A4GALTQ9NPC4 353 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 EMCNQ9ULC0 261 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 COA3Q9Y2R0 106 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 YIF1AO95070 293 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 GLB1P16278 677 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 NAGAP17050 411 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 CLINT1Q14677 625 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 ZNF740Q8NDX6 193 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 KLHDC9Q8NEP7 349 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 SEMA6DQ8NFY4 1073 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 RNF170Q96K19 258 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 ZNF436Q9C0F3 470 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 TMEM9BQ9NQ34 198 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 LOXL2Q9Y4K0 774 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 LRIT2A6NDA9 550 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 FAPQ12884 760 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 RBMS2Q15434 407 aaKnown RBP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 MAFAQ8NHW3 353 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 ZFP90Q8TF47 636 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 TCEAL2Q9H3H9 227 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 SLAMF8Q9P0V8 285 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 FAM96BQ9Y3D0 163 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 SH2D7A6NKC9 451 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 POM121CA8CG34 1229 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 F6UZH7 168 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 H0Y8X5 98 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 C21orf33P30042 268 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 ZNF133P52736 654 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 FOXK2Q01167 660 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 SLCO4C1Q6ZQN7 724 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 ETFBKMTQ8IXQ9 262 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 ZFAND2BQ8WV99 257 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 HRH3Q9Y5N1 445 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 LAMB4A4D0S4 1761 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 SUB1P53999 127 aaKnown RBP eCLIP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 KIAA1024LP59773 190 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 GLYR1Q49A26 553 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 FAM74A1Q5RGS3 127 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 H1FNTQ75WM6 255 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 RPS19BP1Q86WX3 136 aaKnown RBP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 LINC01599Q8WXQ3 324 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 SLC39A13Q96H72 371 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 RIMS4Q9H426 269 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 OSGIN2Q9Y236 505 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 SLC5A10A0PJK1 596 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 ZNF91Q05481 1191 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 MAML2Q8IZL2 1156 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-201ENST00000225964 LILRA2Q8N149 483 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 MITD1Q8WV92 249 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 DVL3Q92997 716 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-201ENST00000225964 RNF32Q9H0A6 362 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 MED17Q9NVC6 651 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 TNFSF11O14788 317 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 CALCBP10092 127 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 CSNK1G2P78368 415 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 ACSM1Q08AH1 577 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 SMAD4Q13485 552 aaKnown RBP12.18□□□□□ -0.46
COL1A1-201ENST00000225964 SLC48A1Q6P1K1 146 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 CPEB2Q7Z5Q1 589 aaKnown RBP12.18□□□□□ -0.46
COL1A1-201ENST00000225964 SEC22AQ96IW7 307 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 ARPC5LQ9BPX5 153 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 USP22Q9UPT9 525 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 LOXHD1Q8IVV2 1947 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 K7ESM1 405 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 SGCEO43556 437 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 TEKQ02763 1124 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 NKAIN1Q4KMZ8 207 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 BCL7AQ4VC05 210 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 OR8G2PQ6IF36 304 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 GHSRQ92847 366 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 FBXO4Q9UKT5 387 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 PPP1R3CQ9UQK1 317 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 KLF13Q9Y2Y9 288 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-201ENST00000225964 OR51B4Q9Y5P0 310 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 SCN11AQ9UI33 1791 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 ABCD4O14678 606 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 SNAPINO95295 136 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 NME2P22392 152 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 MEP1BQ16820 701 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 ZNF626Q68DY1 528 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 KDM8Q8N371 416 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 CISD2Q8N5K1 135 aaKnown RBP12.18□□□□□ -0.46
COL1A1-201ENST00000225964 PARP16Q8N5Y8 322 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 TERB2Q8NHR7 220 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 ISYNA1Q9NPH2 558 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 M0QYG6 137 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 FABP1P07148 127 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms