RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 SELENOPP49908 381 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 COPZ1P61923 177 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 SELENOWP63302 87 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 DUSP7Q16829 419 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 FKBP9P1Q75LS8 142 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 ZNF786Q8N393 782 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 SVOPLQ8N434 492 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 SEMA6DQ8NFY4 1073 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 SLC35B4Q969S0 331 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 KCNS3Q9BQ31 491 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 SF3B5Q9BWJ5 86 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 GORASP2Q9H8Y8 452 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 SAMD4AQ9UPU9 718 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 ARPC4-TTLL3A0A0A6YYG9 625 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 AQP7P3A6NL99 342 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 hCG_2039718K7EN88 272 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 KCNAB3O43448 404 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 UPK3AO75631 287 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 CD247P20963 164 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 RGS8P57771 180 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 EPS8Q12929 822 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 OR7A5Q15622 319 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 GLIPR1L2Q4G1C9 344 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 CREB3L2Q70SY1 520 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 CBLL1Q75N03 491 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 GPAT4Q86UL3 456 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 RANBP3LQ86VV4 465 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 GPR32P1Q8NGA4 272 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 OR4F15Q8NGB8 312 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 VANGL1Q8TAA9 524 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 ASB9Q96DX5 294 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 TRIM15Q9C019 465 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 ACTR3BQ9P1U1 418 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 METRNQ9UJH8 293 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 SH3GLB1Q9Y371 365 aa14.22□□□□□ -0.13
SHKBP1-215ENST00000597649 SH3PXD2BA1X283 911 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 TMEM229AB2RXF0 380 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 FAAHO00519 579 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 FRS3O43559 492 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 IGKV3-15P01624 115 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 CRYBA2P53672 197 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 DVL1P1P54792 670 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 UBE2NP61088 152 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 TRAP1Q12931 704 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 CCNIQ14094 377 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 FXNQ16595 210 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 ZSCAN26Q16670 478 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 C3orf36Q3SXR2 165 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 PGM2L1Q6PCE3 622 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 CYP2R1Q6VVX0 501 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 EPHX4Q8IUS5 362 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 CDK20Q8IZL9 346 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 CADM2Q8N3J6 435 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 NUP37Q8NFH4 326 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 MAGEE2Q8TD90 523 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 UBASH3BQ8TF42 649 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 NEU4Q8WWR8 484 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 ALKBH3Q96Q83 286 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 ARHGDIGQ99819 225 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 OCEL1Q9H607 264 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 ZNF442Q9H7R0 627 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 DCAF13Q9NV06 445 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 RPS6KB2Q9UBS0 482 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 CHST2Q9Y4C5 530 aa14.21□□□□□ -0.13
SHKBP1-215ENST00000597649 ZNF503-AS2A6NEH8 195 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 ZNF587BE7ETH6 402 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 M0R3H8 397 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 CIB2O75838 187 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 KRT33AO76009 404 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 GPIP06744 558 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 PRG2P13727 222 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 IFNGR1P15260 489 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 NPR2P20594 1047 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 MAP2K6P52564 334 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 HOXC5Q00444 222 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 IFI44LQ53G44 452 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 MTX3Q5HYI7 312 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 ASRGL1Q7L266 308 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 ABHD12BQ7Z5M8 362 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 CARM1Q86X55 608 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 FAM169BQ8N8A8 192 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 HSH2DQ96JZ2 352 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 METTL17Q9H7H0 456 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 TMEM27Q9HBJ8 222 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 SELENONQ9NZV5 590 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 TESQ9UGI8 421 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 PRDM4Q9UKN5 801 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 V9GYQ6 96 aa14.2□□□□□ -0.14
SHKBP1-215ENST00000597649 ADRA2AP08913 450 aa14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 CBR1P16152 277 aa14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 ACAA2P42765 397 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 MS4A2Q01362 244 aa14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 FLOT2Q14254 428 aa14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 MSMPQ1L6U9 139 aa14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 TMEM225Q6GV28 225 aa14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 WBP2NLQ6ICG8 309 aa14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 NIPAL3Q6P499 406 aa14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 DEF8Q6ZN54 512 aa14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 VTCN1Q7Z7D3 282 aa14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 COMTD1Q86VU5 262 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms