RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 C9orf135Q5VTT2 229 aa15.59■□□□□ 0.09
E4F1-203ENST00000563643 C1orf140Q5VVS0 124 aa15.59■□□□□ 0.09
E4F1-203ENST00000563643 OR6T1Q8NGN1 323 aa15.59■□□□□ 0.09
E4F1-203ENST00000563643 PIGXQ8TBF5 258 aa15.59■□□□□ 0.09
E4F1-203ENST00000563643 C22orf15Q8WYQ4 148 aa15.59■□□□□ 0.09
E4F1-203ENST00000563643 DNAJA3Q96EY1 480 aa15.59■□□□□ 0.09
E4F1-203ENST00000563643 RACGAP1Q9H0H5 632 aa15.59■□□□□ 0.09
E4F1-203ENST00000563643 G6PC2Q9NQR9 355 aa15.59■□□□□ 0.09
E4F1-203ENST00000563643 ABCD2Q9UBJ2 740 aa15.59■□□□□ 0.09
E4F1-203ENST00000563643 TAGLN3Q9UI15 199 aa15.59■□□□□ 0.09
E4F1-203ENST00000563643 BAG5Q9UL15 447 aa15.59■□□□□ 0.09
E4F1-203ENST00000563643 NOSIPQ9Y314 301 aaKnown RBP15.59■□□□□ 0.09
E4F1-203ENST00000563643 A0A0B4J2E0 115 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 A0A1B0GX12 115 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 SAGP10523 405 aaPredicted RBP15.58■□□□□ 0.08
E4F1-203ENST00000563643 GCH1P30793 250 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 KDELR2P33947 212 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 SLC16A1P53985 500 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 NPTX1Q15818 432 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 SWT1Q5T5J6 900 aaKnown RBP15.58■□□□□ 0.08
E4F1-203ENST00000563643 ZNF613Q6PF04 617 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 PAQR6Q6TCH4 344 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 C5orf46Q6UWT4 87 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 LSRQ86X29 649 aaPredicted RBP15.58■□□□□ 0.08
E4F1-203ENST00000563643 C1orf162Q8NEQ5 155 aaPredicted RBP15.58■□□□□ 0.08
E4F1-203ENST00000563643 SLC38A4Q969I6 547 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 SLC47A1Q96FL8 570 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 DUX5Q96PT3 197 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 MCHR1Q99705 422 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 KCNS3Q9BQ31 491 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 NAA11Q9BSU3 229 aaPredicted RBP15.58■□□□□ 0.08
E4F1-203ENST00000563643 TAPBPLQ9BX59 468 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 PCDHAC1Q9H158 963 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 SPAG4Q9NPE6 437 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 TREM2Q9NZC2 230 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 SELENONQ9NZV5 590 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 GMPR2Q9P2T1 348 aaKnown RBP15.58■□□□□ 0.08
E4F1-203ENST00000563643 SLC9A8Q9Y2E8 581 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 CORINQ9Y5Q5 1042 aa15.58■□□□□ 0.08
E4F1-203ENST00000563643 A0A087WUJ7 227 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 IGHV1-18A0A0C4DH31 117 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 ZNF716A6NP11 495 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 hCG_2039718K7EN88 272 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 PDLIM1O00151 329 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 AHSA1O95433 338 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 PRTN3P24158 256 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 GSK3BP49841 420 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 PRPS1P60891 318 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 EGR4Q05215 589 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 CEACAM7Q14002 265 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 OR7A5Q15622 319 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 CARM1Q86X55 608 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 C1QL4Q86Z23 238 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 CCDC197Q8NCU1 140 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 OR4D11Q8NGI4 311 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 VANGL1Q8TAA9 524 aaPredicted RBP15.57■□□□□ 0.08
E4F1-203ENST00000563643 NANPQ8TBE9 248 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 TMPRSS13Q9BYE2 586 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 MMP27Q9H306 513 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.57■□□□□ 0.08
E4F1-203ENST00000563643 ARL8BQ9NVJ2 186 aa15.57■□□□□ 0.08
E4F1-203ENST00000563643 GPR171O14626 319 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 WNT9BO14905 357 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 FZD7O75084 574 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 WNT11O96014 354 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 CRYAAP02489 173 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 NTF4P34130 210 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 GPR6P46095 362 aaPredicted RBP15.56■□□□□ 0.08
E4F1-203ENST00000563643 CDH12P55289 794 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 KRT72Q14CN4 511 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 LRRC23Q53EV4 343 aaPredicted RBP15.56■□□□□ 0.08
E4F1-203ENST00000563643 CYBRD1Q53TN4 286 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 C1QTNF12Q5T7M4 302 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 RBMS3Q6XE24 437 aaKnown RBP15.56■□□□□ 0.08
E4F1-203ENST00000563643 RBM45Q8IUH3 476 aaKnown RBP15.56■□□□□ 0.08
E4F1-203ENST00000563643 CCDC103Q8IW40 242 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 MFSD8Q8NHS3 518 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 RNF217Q8TC41 542 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 DOK1Q99704 481 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 KATNB1Q9BVA0 655 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 PTDSS2Q9BVG9 487 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 DYNLRB1Q9NP97 96 aa15.56■□□□□ 0.08
E4F1-203ENST00000563643 PDP1Q9P0J1 537 aaPredicted RBP15.56■□□□□ 0.08
E4F1-203ENST00000563643 IGKV1D-42A0A075B6H8 117 aa15.55■□□□□ 0.08
E4F1-203ENST00000563643 A0A0G2JMP0 313 aa15.55■□□□□ 0.08
E4F1-203ENST00000563643 A0A0X1KG70 313 aa15.55■□□□□ 0.08
E4F1-203ENST00000563643 DNAJC9-AS1A6NH13 148 aa15.55■□□□□ 0.08
E4F1-203ENST00000563643 AQP7P3A6NL99 342 aa15.55■□□□□ 0.08
E4F1-203ENST00000563643 FTCDNL1E5RQL4 147 aa15.55■□□□□ 0.08
E4F1-203ENST00000563643 CXCR6O00574 342 aa15.55■□□□□ 0.08
E4F1-203ENST00000563643 PRSS23O95084 383 aa15.55■□□□□ 0.08
E4F1-203ENST00000563643 IGFBP1P08833 259 aaPredicted RBP15.55■□□□□ 0.08
E4F1-203ENST00000563643 FPR2P25090 351 aa15.55■□□□□ 0.08
E4F1-203ENST00000563643 RBMXP38159 391 aaKnown RBP15.55■□□□□ 0.08
E4F1-203ENST00000563643 ENTPD8Q5MY95 495 aa15.55■□□□□ 0.08
E4F1-203ENST00000563643 OTUD3Q5T2D3 398 aaPredicted RBP15.55■□□□□ 0.08
E4F1-203ENST00000563643 KLHL24Q6TFL4 600 aa15.55■□□□□ 0.08
E4F1-203ENST00000563643 FITM2Q8N6M3 262 aa15.55■□□□□ 0.08
E4F1-203ENST00000563643 SIGLECL1Q8N7X8 197 aa15.55■□□□□ 0.08
E4F1-203ENST00000563643 OR4M2Q8NGB6 313 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms