RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 RADILQ96JH8 1075 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 C7orf34Q96L11 122 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 DUSP26Q9BV47 211 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 BTBD2Q9BX70 525 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 PLA2G12AQ9BZM1 189 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 NDEL1Q9GZM8 345 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 ACTR6Q9GZN1 396 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 SLC22A4Q9H015 551 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 IKZF5Q9H5V7 419 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 TMEM38AQ9H6F2 299 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 MARCH7Q9H992 704 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 TPT1P8Q9HAU6 139 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 DDX28Q9NUL7 540 aaKnown RBP5.3□□□□□ -1.56
CPSF7-219ENST00000539952 SIRT5Q9NXA8 310 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 MRPL39Q9NYK5 338 aaKnown RBP5.3□□□□□ -1.56
CPSF7-219ENST00000539952 CISD1Q9NZ45 108 aaKnown RBP5.3□□□□□ -1.56
CPSF7-219ENST00000539952 VPS29Q9UBQ0 182 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.3□□□□□ -1.565e-8■■■■■ 34.6
CPSF7-219ENST00000539952 SSR3Q9UNL2 185 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 B3GALT5Q9Y2C3 310 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 GPR55Q9Y2T6 319 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-219ENST00000539952 RPL36Q9Y3U8 105 aaKnown RBP5.3□□□□□ -1.56
CPSF7-219ENST00000539952 N6AMT1Q9Y5N5 214 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 RAI1Q7Z5J4 1906 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-219ENST00000539952 PKD1L1Q8TDX9 2849 aa5.3□□□□□ -1.56
CPSF7-219ENST00000539952 FREM1Q5H8C1 2179 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 IGHV4-30-2A0A087WSY4 118 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 IQCMA0A1B0GVH7 501 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 C1orf226A1L170 272 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 ANKRD34BA5PLL1 514 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 CCDC182A6NF36 153 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 H0YIV9 168 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 RNASET2O00584 256 aaKnown RBP5.29□□□□□ -1.56
CPSF7-219ENST00000539952 KIAA0513O60268 411 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 NDUFS7O75251 213 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 CCNB2O95067 398 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 MFN2O95140 757 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 IL1AP01583 271 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 CD8AP01732 235 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 ATP1B1P05026 303 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 SCG5P05408 212 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 LCKP06239 509 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 GAAP10253 952 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 GABRB1P18505 474 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 RHCEP18577 417 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 SDC1P18827 310 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 M6PRP20645 277 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 HNF1AP20823 631 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 CFL1P23528 166 aaKnown RBP5.29□□□□□ -1.56
CPSF7-219ENST00000539952 NUDT6P53370 316 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 SNRPGP62308 76 aaKnown RBP5.29□□□□□ -1.56
CPSF7-219ENST00000539952 KCNJ10P78508 379 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 IFITM2Q01629 132 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 ACSM2AQ08AH3 577 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 MGAT2Q10469 447 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 FAPQ12884 760 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 COX10Q12887 443 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 ASAH1Q13510 395 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 GPR50Q13585 617 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 DDX39BQ13838 428 aaKnown RBP5.29□□□□□ -1.56
CPSF7-219ENST00000539952 RGNQ15493 299 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 TAB1Q15750 504 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 CPSF6Q16630 551 aaKnown RBP eCLIP5.29□□□□□ -1.56
CPSF7-219ENST00000539952 PGGHGQ32M88 737 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 IQCCQ4KMZ1 466 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 KLHL22Q53GT1 634 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 SPIN4Q56A73 249 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 FBXO48Q5FWF7 155 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 ZNF362Q5T0B9 420 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-219ENST00000539952 PDSS1Q5T2R2 415 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 CPTPQ5TA50 214 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 RAET1LQ5VY80 246 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 FRG2Q64ET8 278 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 ACSM2BQ68CK6 577 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 OR4F3Q6IEY1 312 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 FAM166AQ6J272 317 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 MZT2BQ6NZ67 158 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 FAM111BQ6SJ93 734 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 TMPRSS11AQ6ZMR5 421 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 PTCHD4Q6ZW05 846 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 ZNF767PQ75MW2 155 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 DTX2Q86UW9 622 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 ZBTB46Q86UZ6 589 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 SLC7A5P1Q8MH63 180 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 OR8H2Q8N162 312 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 RFLNBQ8N5W9 214 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 KRTCAP2Q8N6L1 136 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 CLDN22Q8N7P3 220 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 PROKR2Q8NFJ6 384 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 OR10G2Q8NGC3 310 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 SGMS2Q8NHU3 365 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 APH1BQ8WW43 257 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 GEMIN6Q8WXD5 167 aaKnown RBP5.29□□□□□ -1.56
CPSF7-219ENST00000539952 AP3S1Q92572 193 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 RPL3LQ92901 407 aaKnown RBP5.29□□□□□ -1.56
CPSF7-219ENST00000539952 COQ8BQ96D53 544 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 TMEM80Q96HE8 168 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 MED30Q96HR3 178 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 FRG2BQ96QU4 278 aa5.29□□□□□ -1.56
CPSF7-219ENST00000539952 ADOQ96SZ5 270 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms