RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 PARP8Q8N3A8 854 aa12.13□□□□□ -0.47
CD44-224ENST00000526669 SDR9C7Q8NEX9 313 aa12.13□□□□□ -0.47
CD44-224ENST00000526669 NOXO1Q8NFA2 376 aa12.13□□□□□ -0.47
CD44-224ENST00000526669 OR2T33Q8NG76 320 aa12.13□□□□□ -0.47
CD44-224ENST00000526669 OR6N1Q8NGY5 312 aa12.13□□□□□ -0.47
CD44-224ENST00000526669 OR4K13Q8NH42 304 aa12.13□□□□□ -0.47
CD44-224ENST00000526669 OR6X1Q8NH79 312 aa12.13□□□□□ -0.47
CD44-224ENST00000526669 ALKBH3Q96Q83 286 aaPredicted RBP12.13□□□□□ -0.47
CD44-224ENST00000526669 MBOAT4Q96T53 435 aa12.13□□□□□ -0.47
CD44-224ENST00000526669 SLCO5A1Q9H2Y9 848 aa12.13□□□□□ -0.47
CD44-224ENST00000526669 FN3KQ9H479 309 aa12.13□□□□□ -0.47
CD44-224ENST00000526669 SLC7A10Q9NS82 523 aa12.13□□□□□ -0.47
CD44-224ENST00000526669 PARPBPQ9NWS1 579 aa12.13□□□□□ -0.47
CD44-224ENST00000526669 UPB1Q9UBR1 384 aa12.13□□□□□ -0.47
CD44-224ENST00000526669 RCE1Q9Y256 329 aa12.13□□□□□ -0.47
CD44-224ENST00000526669 HELZ2Q9BYK8 2649 aaKnown RBP12.12□□□□□ -0.47
CD44-224ENST00000526669 M0R3G1 203 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 KRT33AO76009 404 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 AGFG2O95081 481 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 IL18BPO95998 194 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 IGHG1P01857 330 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 RNF224P0DH78 156 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 PGA4P0DJD7 388 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 PGA3P0DJD8 388 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 CDH2P19022 906 aaPredicted RBP12.12□□□□□ -0.47
CD44-224ENST00000526669 CHRNB4P30926 498 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 PTDSS1P48651 473 aaKnown RBP12.12□□□□□ -0.47
CD44-224ENST00000526669 FMODQ06828 376 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.12□□□□□ -0.47
CD44-224ENST00000526669 SRSF1Q07955 248 aaKnown RBP eCLIP12.12□□□□□ -0.47
CD44-224ENST00000526669 PTGES3Q15185 160 aaKnown RBP12.12□□□□□ -0.47
CD44-224ENST00000526669 GPR139Q6DWJ6 353 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 SLC27A4Q6P1M0 643 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 LEG1Q6P5S2 330 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 LINGO2Q7L985 606 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 MRGPRGQ86SM5 289 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 JAZF1Q86VZ6 243 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 GPR137CQ8N3F9 429 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 ARIH2OSQ8N7S6 290 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 CYB561A3Q8NBI2 242 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 ITLN2Q8WWU7 325 aaPredicted RBP12.12□□□□□ -0.47
CD44-224ENST00000526669 ASB5Q8WWX0 329 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 ZNF566Q969W8 418 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 SLC25A44Q96H78 314 aaPredicted RBP12.12□□□□□ -0.47
CD44-224ENST00000526669 ADAD1Q96M93 576 aaKnown RBP12.12□□□□□ -0.47
CD44-224ENST00000526669 GABARAPL3Q9BY60 117 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 SLC25A19Q9HC21 320 aa12.12□□□□□ -0.47
CD44-224ENST00000526669 ZNF629Q9UEG4 869 aaPredicted RBP12.12□□□□□ -0.47
CD44-224ENST00000526669 A6NIZ1 184 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 NPIPB13A6NJU9 1138 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 ZAR1LA6NP61 321 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 NPIPB4C9JG80 1138 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 DLGAP1O14490 977 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 XKRYO14609 159 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 TXNDC12O95881 172 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 GRK5P34947 590 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 CDKN2AP42771 156 aaKnown RBP12.11□□□□□ -0.47
CD44-224ENST00000526669 GIPRP48546 466 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 RAP1BP61224 184 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 RAP1AP62834 184 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 CDK5Q00535 292 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 FAPQ12884 760 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 HDDC2Q7Z4H3 204 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 C20orf196Q8IYI0 205 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 LNX2Q8N448 690 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 PACRGLQ8N7B6 248 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 OR52E2Q8NGJ4 325 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 TMEM54Q969K7 222 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 KCNK17Q96T54 332 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 NMNAT3Q96T66 252 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 PIGMQ9H3S5 423 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 RERGLQ9H628 205 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 PLSCR4Q9NRQ2 329 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 SMPD3Q9NY59 655 aaPredicted RBP12.11□□□□□ -0.47
CD44-224ENST00000526669 TVP23BQ9NYZ1 205 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 GLTPQ9NZD2 209 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 ENOPH1Q9UHY7 261 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 FASNP49327 2511 aaKnown RBP12.11□□□□□ -0.47
CD44-224ENST00000526669 TENM4Q6N022 2769 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 SPTAN1Q13813 2472 aaKnown RBP12.11□□□□□ -0.47
CD44-224ENST00000526669 DOPEY1Q5JWR5 2465 aa12.11□□□□□ -0.47
CD44-224ENST00000526669 LRRK2Q5S007 2527 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 IGKV1D-43A0A0B4J1Z2 117 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 ARPC3O15145 178 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 SEC14L2O76054 403 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 CD8BP10966 210 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 APEHP13798 732 aaKnown RBP12.1□□□□□ -0.47
CD44-224ENST00000526669 AQP4P55087 323 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 TSC22D1Q15714 1073 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 SLX4IPQ5VYV7 408 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 FAM205BPQ63HN1 556 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 ZNF474Q6S9Z5 364 aaPredicted RBP12.1□□□□□ -0.47
CD44-224ENST00000526669 ZNF808Q8N4W9 903 aaPredicted RBP12.1□□□□□ -0.47
CD44-224ENST00000526669 SLC37A3Q8NCC5 494 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 CA5BP1Q8WTZ4 195 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 CYGBQ8WWM9 190 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 NSMAFQ92636 917 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 OTULINQ96BN8 352 aa12.1□□□□□ -0.47
CD44-224ENST00000526669 ZNF837Q96EG3 531 aaPredicted RBP12.1□□□□□ -0.47
CD44-224ENST00000526669 FOXN4Q96NZ1 517 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms