RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ANKRD63C9JTQ0 380 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 H0YL77 283 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 GPRIN2O60269 458 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 LCMT2O60294 686 aaKnown RBP3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 CDC40O60508 579 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 PDE5AO76074 875 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 CYP11B1P15538 503 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 GNB3P16520 340 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 PDHA2P29803 388 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 SRP14P37108 136 aaKnown RBP3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 TMEM50BP56557 158 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 FHL1Q13642 323 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 GANABQ14697 944 aaKnown RBP3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 LINC01620Q4KN68 170 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 MS4A13Q5J8X5 152 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 MUC21Q5SSG8 566 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 FAM120AOSQ5T036 256 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 FAM53AQ6NSI3 398 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 CCBE1Q6UXH8 406 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 Q6ZSR9 355 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 DPY19L4Q7Z388 723 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 C16orf62Q7Z3J2 963 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 TMEM17Q86X19 198 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 CATSPERDQ86XM0 798 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 SLC13A5Q86YT5 568 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 METTL4Q8N3J2 472 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 CLDN19Q8N6F1 224 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 SAMD12Q8N8I0 201 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 ANKFN1Q8N957 763 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 OR52B6Q8NGF0 335 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 OR56B2PQ8NGI1 322 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 FAM57AQ8TBR7 257 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 C11orf52Q96A22 123 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 TADA1Q96BN2 335 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 LRR1Q96L50 414 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 PSKH2Q96QS6 385 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 TUBGCP2Q9BSJ2 902 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 CABLES2Q9BTV7 478 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 SMYD3Q9H7B4 428 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 NT5DC2Q9H857 520 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 MOB1AQ9H8S9 216 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 FANCEQ9HB96 536 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 CSNK1G1Q9HCP0 422 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 FAM114A2Q9NRY5 505 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 MED29Q9NX70 200 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 AIPL1Q9NZN9 384 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 GNPTGQ9UJJ9 305 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 ICAM5Q9UMF0 924 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 ALPK2Q86TB3 2170 aa3.87□□□□□ -1.79
HMGB1P23-201ENST00000518743 DYNC2H1Q8NCM8 4307 aaKnown RBP3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZNF407Q9C0G0 2248 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 TRBV7-9A0A0J9YWB2 115 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 A0A1B0GTH9 108 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 A0A1W2PPR1 153 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 GOLGA8IPA6NC78 632 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 GOLGA8JA6NMD2 632 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 NPIPA7E9PJI5 369 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 F5H5T6 163 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 CASKO14936 926 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 STX7O15400 261 aaKnown RBP3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZSCAN12O43309 604 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 SNAP91O60641 907 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 RAMP1O60894 148 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 NXPH4O95158 308 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 MBD3O95983 291 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 CALCAP01258 141 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 IGLV2-11P01706 119 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 PIGRP01833 764 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 PRB2P02812 416 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 OPN1LWP04000 364 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 CAPN1P07384 714 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 SP1P08047 785 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 CD48P09326 243 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 HSMCR30P0CW71 290 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 NPIPA8P0DM63 369 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZNF24P17028 368 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 IGFBP5P24593 272 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 CCNHP51946 323 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 RIDAP52758 137 aaKnown RBP3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 AIF1P55008 147 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 SRPXP78539 464 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 BDH1Q02338 343 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 CAPRIN1Q14444 709 aaKnown RBP3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 FAM189A2Q15884 450 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 SSX2Q16385 188 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 KNOP1Q1ED39 458 aaKnown RBP3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 MS4A18Q3C1V0 323 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 TAF3Q5VWG9 929 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 CERS6Q6ZMG9 384 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZNF781Q8N8C0 355 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 C12orf29Q8N999 325 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 DCAF4L2Q8NA75 395 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 OR5B17Q8NGF7 314 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 OR52K2Q8NGK3 314 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 OR4F5Q8NH21 305 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 OR52J3Q8NH60 311 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 OR2T6Q8NHC8 308 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 FAM76AQ8TAV0 307 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms