RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 COQ5Q5HYK3 327 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 HIST3H2AQ7L7L0 130 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 PIWIL3Q7Z3Z3 882 aaKnown RBP17.04■□□□□ 0.32
SFXN1-203ENST00000502393 TSPYL5Q86VY4 417 aaPredicted RBP17.04■□□□□ 0.32
SFXN1-203ENST00000502393 OR8J3Q8NGG0 315 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 HIST1H2ACQ93077 130 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 MS4A3Q96HJ5 214 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 ECSITQ9BQ95 431 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 BEX2Q9BXY8 128 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 GLTPQ9NZD2 209 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 ZNF224Q9NZL3 707 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 FBXL3Q9UKT7 428 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 SPEF1Q9Y4P9 236 aa17.04■□□□□ 0.32
SFXN1-203ENST00000502393 KPNA4O00629 521 aaPredicted RBP17.03■□□□□ 0.32
SFXN1-203ENST00000502393 ENTPD5O75356 428 aa17.03■□□□□ 0.32
SFXN1-203ENST00000502393 RAB36O95755 333 aa17.03■□□□□ 0.32
SFXN1-203ENST00000502393 ASAH2BP0C7U1 165 aa17.03■□□□□ 0.32
SFXN1-203ENST00000502393 ZNF35P13682 527 aa17.03■□□□□ 0.32
SFXN1-203ENST00000502393 APEHP13798 732 aaKnown RBP17.03■□□□□ 0.32
SFXN1-203ENST00000502393 DAOP14920 347 aa17.03■□□□□ 0.32
SFXN1-203ENST00000502393 ZNF16P17020 682 aaPredicted RBP17.03■□□□□ 0.32
SFXN1-203ENST00000502393 PTDSS1P48651 473 aaKnown RBP17.03■□□□□ 0.32
SFXN1-203ENST00000502393 CRYBA2P53672 197 aa17.03■□□□□ 0.32
SFXN1-203ENST00000502393 IQCCQ4KMZ1 466 aa17.03■□□□□ 0.32
SFXN1-203ENST00000502393 CALHM3Q86XJ0 350 aa17.03■□□□□ 0.32
SFXN1-203ENST00000502393 LRRC17Q8N6Y2 441 aa17.03■□□□□ 0.32
SFXN1-203ENST00000502393 ZNF566Q969W8 418 aa17.03■□□□□ 0.32
SFXN1-203ENST00000502393 LRRC58Q96CX6 371 aa17.03■□□□□ 0.32
SFXN1-203ENST00000502393 SLC25A44Q96H78 314 aaPredicted RBP17.03■□□□□ 0.32
SFXN1-203ENST00000502393 DYNLRB1Q9NP97 96 aa17.03■□□□□ 0.32
SFXN1-203ENST00000502393 BAG5Q9UL15 447 aa17.03■□□□□ 0.32
SFXN1-203ENST00000502393 IGHV4-61A0A0C4DH41 118 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 SH3PXD2BA1X283 911 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 LMX1BO60663 402 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 SASH3O75995 380 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 STAMBPO95630 424 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 TROVE2P10155 538 aaKnown RBP eCLIP17.02■□□□□ 0.32
SFXN1-203ENST00000502393 GIFP27352 417 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 GIPRP48546 466 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 MMEL1Q495T6 779 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 RABL3Q5HYI8 236 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 FAM166AQ6J272 317 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 CDK20Q8IZL9 346 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 ZCCHC24Q8N2G6 241 aaKnown RBP17.02■□□□□ 0.32
SFXN1-203ENST00000502393 MRPL24Q96A35 216 aaKnown RBP17.02■□□□□ 0.32
SFXN1-203ENST00000502393 PRSS27Q9BQR3 290 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 BPESC1Q9GZL8 116 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 POLR2J2Q9GZM3 115 aaKnown RBP17.02■□□□□ 0.32
SFXN1-203ENST00000502393 SHARPINQ9H0F6 387 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 POLR2J3Q9H1A7 115 aaKnown RBP17.02■□□□□ 0.32
SFXN1-203ENST00000502393 SH3GLB1Q9Y371 365 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 ATRQ13535 2644 aa17.02■□□□□ 0.32
SFXN1-203ENST00000502393 BBIP1A8MTZ0 92 aa17.01■□□□□ 0.31
SFXN1-203ENST00000502393 FXYD1O00168 92 aa17.01■□□□□ 0.31
SFXN1-203ENST00000502393 ADRA2AP08913 450 aa17.01■□□□□ 0.31
SFXN1-203ENST00000502393 OR8G3PP0DMU2 310 aa17.01■□□□□ 0.31
SFXN1-203ENST00000502393 UMPSP11172 480 aa17.01■□□□□ 0.31
SFXN1-203ENST00000502393 ZNF23P17027 643 aa17.01■□□□□ 0.31
SFXN1-203ENST00000502393 GLRXP35754 106 aa17.01■□□□□ 0.31
SFXN1-203ENST00000502393 ERICH5Q6P6B1 374 aa17.01■□□□□ 0.31
SFXN1-203ENST00000502393 LRFN4Q6PJG9 635 aa17.01■□□□□ 0.31
SFXN1-203ENST00000502393 NANOGNBQ7Z5D8 188 aa17.01■□□□□ 0.31
SFXN1-203ENST00000502393 CARM1Q86X55 608 aa17.01■□□□□ 0.31
SFXN1-203ENST00000502393 SKA3Q8IX90 412 aa17.01■□□□□ 0.31
SFXN1-203ENST00000502393 SLC22A24Q8N4F4 322 aa17.01■□□□□ 0.31
SFXN1-203ENST00000502393 MSI2Q96DH6 328 aaKnown RBP17.01■□□□□ 0.31
SFXN1-203ENST00000502393 MEPEQ9NQ76 525 aaPredicted RBP17.01■□□□□ 0.31
SFXN1-203ENST00000502393 KCNS2Q9ULS6 477 aa17.01■□□□□ 0.31
SFXN1-203ENST00000502393 LOC100289279A0A1B0GTE1 492 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 COL6A5A8TX70 2615 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 BLOC1S5-TXNDC5H3BN57 136 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 SYNGR3O43761 229 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 BCL10O95999 233 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 IGF2P01344 180 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 IFNA14P01570 189 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 MT-ND1P03886 318 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 IGFBP1P08833 259 aaPredicted RBP17■□□□□ 0.31
SFXN1-203ENST00000502393 PGA4P0DJD7 388 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 PGA3P0DJD8 388 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 RBM34P42696 430 aaKnown RBP17■□□□□ 0.31
SFXN1-203ENST00000502393 ARFIP2P53365 341 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 RPS23P62266 143 aaKnown RBP17■□□□□ 0.31
SFXN1-203ENST00000502393 GALK2Q01415 458 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 KLF10Q13118 480 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 MELKQ14680 651 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 MAPRE2Q15555 327 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 ZNF786Q8N393 782 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 MRPL37Q9BZE1 423 aaKnown RBP17■□□□□ 0.31
SFXN1-203ENST00000502393 MXRA5Q9NR99 2828 aa17■□□□□ 0.31
SFXN1-203ENST00000502393 MRASO14807 208 aa16.99■□□□□ 0.31
SFXN1-203ENST00000502393 DHHO43323 396 aa16.99■□□□□ 0.31
SFXN1-203ENST00000502393 OR5F1O95221 314 aa16.99■□□□□ 0.31
SFXN1-203ENST00000502393 FARS2O95363 451 aaKnown RBP16.99■□□□□ 0.31
SFXN1-203ENST00000502393 IGHG1P01857 330 aa16.99■□□□□ 0.31
SFXN1-203ENST00000502393 SERPINA5P05154 406 aa16.99■□□□□ 0.31
SFXN1-203ENST00000502393 LSP1P33241 339 aa16.99■□□□□ 0.31
SFXN1-203ENST00000502393 TAS2R41P59536 307 aa16.99■□□□□ 0.31
SFXN1-203ENST00000502393 RAB39AQ14964 217 aa16.99■□□□□ 0.31
SFXN1-203ENST00000502393 FXNQ16595 210 aa16.99■□□□□ 0.31
SFXN1-203ENST00000502393 HIST3H3Q16695 136 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms