RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 BORCS5Q969J3 196 aa9.23□□□□□ -0.93
HDAC3-214ENST00000495485 RASD2Q96D21 266 aa9.23□□□□□ -0.93
HDAC3-214ENST00000495485 JSRP1Q96MG2 331 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-214ENST00000495485 KCTD7Q96MP8 289 aa9.23□□□□□ -0.93
HDAC3-214ENST00000495485 TSPAN32Q96QS1 320 aa9.23□□□□□ -0.93
HDAC3-214ENST00000495485 ZNF587Q96SQ5 575 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-214ENST00000495485 UTP23Q9BRU9 249 aaKnown RBP9.23□□□□□ -0.93
HDAC3-214ENST00000495485 OR51E2Q9H255 320 aa9.23□□□□□ -0.93
HDAC3-214ENST00000495485 ADGRL4Q9HBW9 690 aa9.23□□□□□ -0.93
HDAC3-214ENST00000495485 FANCFQ9NPI8 374 aa9.23□□□□□ -0.93
HDAC3-214ENST00000495485 RPRD1BQ9NQG5 326 aaKnown RBP9.23□□□□□ -0.93
HDAC3-214ENST00000495485 B4GALT7Q9UBV7 327 aa9.23□□□□□ -0.93
HDAC3-214ENST00000495485 BOKQ9UMX3 212 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-214ENST00000495485 RPH3AQ9Y2J0 694 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-214ENST00000495485 ARPC4-TTLL3A0A0A6YYG9 625 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 PNMA8CA0A1B0GUJ8 204 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 TRDV1A0A1B0GX56 115 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 ZC3H12DA2A288 527 aaKnown RBP9.22□□□□□ -0.93
HDAC3-214ENST00000495485 OR6C68A6NDL8 312 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 LIPT2A6NK58 231 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 FTCDNL1E5RQL4 147 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 H3BML4 177 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 SULT2B1O00204 365 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 ADAM10O14672 748 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 TMCC2O75069 709 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 FZD7O75084 574 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 VAMP5O95183 116 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 APOL3O95236 402 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 PMS2P2O95744 297 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 IL1AP01583 271 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 CELA2AP08217 269 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 CCL3P10147 92 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 GAAP10253 952 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 SRD5A2P31213 254 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 FGF9P31371 208 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-214ENST00000495485 CDKN2AP42771 156 aaKnown RBP9.22□□□□□ -0.93
HDAC3-214ENST00000495485 RORCP51449 518 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 OR2B6P58173 313 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 NCS1P62166 190 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 MFAP5Q13361 173 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 AQP6Q13520 282 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 ZNF846Q147U1 533 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 SSX1Q16384 188 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 BICRALQ6AI39 1079 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 TMEM225Q6GV28 225 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 VASH1Q7L8A9 365 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-214ENST00000495485 ATCAYQ86WG3 371 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 UEVLDQ8IX04 471 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 ZADH2Q8N4Q0 377 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 WDSUB1Q8N9V3 476 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 MCFD2Q8NI22 146 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 NDNFQ8TB73 568 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 ASB17Q8WXJ9 295 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 ZMYND19Q96E35 227 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-214ENST00000495485 KLHL15Q96M94 604 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 RBP7Q96R05 134 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 OR5B2Q96R09 309 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 DDOQ99489 341 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 MED18Q9BUE0 208 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 HCAR1Q9BXC0 346 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 OR11A1Q9GZK7 315 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 ZNF552Q9H707 407 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-214ENST00000495485 SRA1Q9HD15 236 aaKnown RBP9.22□□□□□ -0.93
HDAC3-214ENST00000495485 SH2D2AQ9NP31 389 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 VSX1Q9NZR4 365 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-214ENST00000495485 PEX16Q9Y5Y5 336 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 POLEQ07864 2286 aa9.22□□□□□ -0.93
HDAC3-214ENST00000495485 HELZ2Q9BYK8 2649 aaKnown RBP9.22□□□□□ -0.93
HDAC3-214ENST00000495485 FASNP49327 2511 aaKnown RBP9.22□□□□□ -0.93
HDAC3-214ENST00000495485 PCNX3Q9H6A9 2034 aa9.21□□□□□ -0.93
HDAC3-214ENST00000495485 A0A1W2PNV4 684 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 PRSS37A4D1T9 235 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 CLDN25C9JDP6 229 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 J3QLW9 94 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 DNPH1O43598 174 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 PLPP2O43688 288 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 HLA-DQA2P01906 255 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 GYPBP06028 91 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 CD1AP06126 327 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 MRPL3P09001 348 aaKnown RBP9.21□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF19P17023 458 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 CELP19835 753 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 RAC1P63000 192 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 GLO1Q04760 184 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 KLRB1Q12918 225 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 MYBPHQ13203 477 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 TOMM20Q15388 145 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 INAQ16352 499 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 ACKR1Q16570 336 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF829Q3KNS6 432 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-214ENST00000495485 TMEM176BQ3YBM2 270 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-214ENST00000495485 EEF1A1P5Q5VTE0 462 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 RAET1LQ5VY80 246 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 B3GNTL1Q67FW5 361 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-214ENST00000495485 TUBA3EQ6PEY2 450 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 PAQR6Q6TCH4 344 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 SLC35D2Q76EJ3 337 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 KLBQ86Z14 1044 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 TMEM99Q8N816 258 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 FDCSPQ8NFU4 85 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms