RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 LIN54Q6MZP7 749 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 THSD4Q6ZMP0 1018 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 ZNF813Q6ZN06 617 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 ZNF765Q7L2R6 523 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 SSX9Q7RTT3 188 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 ZDHHC12Q96GR4 267 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 LAT2Q9GZY6 243 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 HRH4Q9H3N8 390 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 RNF122Q9H9V4 155 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 SMCO4Q9NRQ5 59 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 METTL1Q9UBP6 276 aaKnown RBP15.32■□□□□ 0.04
PMS1-213ENST00000441310 GPR34Q9UPC5 381 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 DMRT1Q9Y5R6 373 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 OIP5O43482 229 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 ERAL1O75616 437 aaKnown RBP15.32■□□□□ 0.04
PMS1-213ENST00000441310 PPP1R3DO95685 299 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 APODP05090 189 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 OR4E1P0C645 316 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 OR8U8P0C7N1 319 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 EIF2S3P41091 472 aaKnown RBP15.32■□□□□ 0.04
PMS1-213ENST00000441310 NCBP2P52298 156 aaKnown RBP eCLIP15.32■□□□□ 0.045e-8■■■□□ 15.7
PMS1-213ENST00000441310 CLDN2P57739 230 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 FOXK2Q01167 660 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 DLX2Q07687 328 aaPredicted RBP15.32■□□□□ 0.04
PMS1-213ENST00000441310 CLINT1Q14677 625 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 ELAVL1Q15717 326 aaKnown RBP15.32■□□□□ 0.04
PMS1-213ENST00000441310 FAM46CQ5VWP2 391 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 ACOT7LQ6ZUV0 252 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 SDR9C7Q8NEX9 313 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 TMED6Q8WW62 240 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 GTF3AQ92664 365 aaKnown RBP15.32■□□□□ 0.04
PMS1-213ENST00000441310 AHSPQ9NZD4 102 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 CPED1A4D0V7 1026 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 C2orf74A8MZ97 194 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 SKP2Q13309 424 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 ALKBH1Q13686 389 aaKnown RBP15.32■□□□□ 0.04
PMS1-213ENST00000441310 IRF4Q15306 451 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 ZNF750Q32MQ0 723 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 KRBOX4Q5JUW0 171 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 C17orf64Q86WR6 236 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 PFN4Q8NHR9 129 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 SNX33Q8WV41 574 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 PPP1R1CQ8WVI7 109 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 NRIP2Q9BQI9 281 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 DPEP2Q9H4A9 486 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 BCL2L10Q9HD36 194 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 ACKR4Q9NPB9 350 aa15.32■□□□□ 0.04
PMS1-213ENST00000441310 A0A0A6YYC8 382 aaPredicted RBP15.31■□□□□ 0.04
PMS1-213ENST00000441310 IDSB3KWA1 339 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 I3L1I5 382 aaPredicted RBP15.31■□□□□ 0.04
PMS1-213ENST00000441310 BHLHE40O14503 412 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 TMPRSS11DO60235 418 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 CD3DP04234 171 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 SLC35G4P0C7Q5 338 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 AMER3Q8N944 861 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 ARSGQ96EG1 525 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 CD180Q99467 661 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 GGACTQ9BVM4 153 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 HDAC8Q9BY41 377 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 NOP16Q9Y3C1 178 aaKnown RBP15.31■□□□□ 0.04
PMS1-213ENST00000441310 USP34Q70CQ2 3546 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 TRBV23OR9-2A0A075B6M9 112 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 C17orf113A0A1B0GUU1 675 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 GGT3PA6NGU5 568 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 H3BSH0 61 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 RAB40ALP0C0E4 278 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 MAKP20794 623 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 RAB2AP61019 212 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 NUDT13Q86X67 352 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 GJD3Q8N144 294 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 ZNF561Q8N587 486 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 ZNF565Q8N9K5 539 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 RAB40AQ8WXH6 277 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 ISOC2Q96AB3 205 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 COX14Q96I36 57 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 HSPA12BQ96MM6 686 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 RSPH9Q9H1X1 276 aaPredicted RBP15.31■□□□□ 0.04
PMS1-213ENST00000441310 TCF7L1Q9HCS4 588 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 C20orf141Q9NUB4 165 aa15.31■□□□□ 0.04
PMS1-213ENST00000441310 SIDT1Q9NXL6 827 aaKnown RBP15.31■□□□□ 0.04
PMS1-213ENST00000441310 A0A087WV48 116 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 RHPN2P1A8MT19 583 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 H7C417 338 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 OGG1O15527 345 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 ADH6P28332 368 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 ZNF345Q14585 488 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 RD3Q7Z3Z2 195 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 OR51A7Q8NH64 312 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 ARHGDIGQ99819 225 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 MTFP1Q9UDX5 166 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 A6NLC8 198 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 AGPAT2O15120 278 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 SNRNP200O75643 2136 aaKnown RBP15.3■□□□□ 0.04
PMS1-213ENST00000441310 GLSO94925 669 aaPredicted RBP15.3■□□□□ 0.04
PMS1-213ENST00000441310 SPTBP11277 2137 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 AVPR2P30518 371 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 OR2B8PP59922 312 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 OR1J2Q8NGS2 313 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 OR13C2Q8NGS9 318 aa15.3■□□□□ 0.04
PMS1-213ENST00000441310 LINC00615Q96LM1 132 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 537.7 ms