RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 CDHR2Q9BYE9 1310 aa1.64□□□□□ -2.15
RNU6-48P-201ENST00000384161 CENPJQ9HC77 1338 aaPredicted RBP1.64□□□□□ -2.15
RNU6-48P-201ENST00000384161 WDR62O43379 1518 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 TRAV39A0A0B4J263 110 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 IGHV3-66A0A0C4DH42 116 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 PLAC8L1A1L4L8 177 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 TMEM150BA6NC51 233 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 SOX15O60248 233 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 GAPDHP04406 335 aaKnown RBP1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 CISD3P0C7P0 127 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 NCK1P16333 377 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 ZNF823P16415 610 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 CCR8P51685 355 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 AIF1P55008 147 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 CDH4P55283 916 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 FBXW4P57775 412 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 SLAQ13239 276 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 ZNF77Q15935 545 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 RSPO1Q2MKA7 263 aaPredicted RBP1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 C5orf47Q569G3 176 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 KDM7AQ6ZMT4 941 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 TMEM179Q6ZVK1 233 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 CEP112Q8N8E3 955 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 CYB561D1Q8N8Q1 229 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 ZNF557Q8N988 423 aaPredicted RBP1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 OR2G2Q8NGZ5 317 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 UBALD1Q8TB05 177 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 LKAAEAR1Q8TD35 194 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 ZFP90Q8TF47 636 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 BMFQ96LC9 184 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 MS4A4EQ96PG1 132 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 OR8B4Q96RC9 309 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 CRACR2AQ9BSW2 395 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 NDFIP1Q9BT67 221 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 PARP12Q9H0J9 701 aaKnown RBP1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 EXTL2Q9UBQ6 330 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 PEX16Q9Y5Y5 336 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 NUP214P35658 2090 aaPredicted RBP1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 MROH7-TTC4A0A0A0MT08 1334 aa1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 KIF26AQ9ULI4 1882 aaPredicted RBP1.63□□□□□ -2.15
RNU6-48P-201ENST00000384161 KMT2BQ9UMN6 2715 aaPredicted RBP1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 CEMIPQ8WUJ3 1361 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 IGLV3-22A0A075B6J6 115 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 A0A1B0GVI7 797 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 ERVV-1B6SEH8 477 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 CCL21O00585 134 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 B4GALT5O43286 388 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 EIF3GO75821 320 aaKnown RBP eCLIP1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 ZNF30P17039 623 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 CNR1P21554 472 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 PMELP40967 661 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 HNMTP50135 292 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 RPL23AP62750 156 aaKnown RBP1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 RPS21P63220 83 aaKnown RBP1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 TCP10Q12799 353 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 IL24Q13007 206 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 CHIT1Q13231 466 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 FAM83EQ2M2I3 478 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 LINC00483Q53H64 154 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 C6orf226Q5I0X4 101 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 OR2A2Q6IF42 318 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 GALNT17Q6IS24 598 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 NANOGP8Q6NSW7 305 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 STRADAQ7RTN6 431 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 FAM86B1Q8N7N1 296 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 SGK3Q96BR1 496 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 PLEKHA8Q96JA3 519 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 PSKH2Q96QS6 385 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 SPIN2AQ99865 258 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 SPIN2BQ9BPZ2 258 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 TRIM62Q9BVG3 475 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 GABARAPL3Q9BY60 117 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 RPP21Q9H633 154 aaKnown RBP1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 FN3KRPQ9HA64 309 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 NOX3Q9HBY0 568 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 SLC40A1Q9NP59 571 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 CLEC4AQ9UMR7 237 aa1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 F11RQ9Y624 299 aaKnown RBP1.62□□□□□ -2.15
RNU6-48P-201ENST00000384161 PCM1Q15154 2024 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 CABIN1Q9Y6J0 2220 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 KIR2DL5BA0A0G2JN68 375 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 KIR2DL5BA0A0G2JPC4 375 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 A0A0U1RQS6 177 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 SPRR5A0A1B0GTR4 108 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 A0A1B0GVL5 298 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 A0A1W2PQ67 120 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 OR52A4PA6NMU1 304 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 HAS3O00219 553 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 CD5LO43866 347 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 CTDNEP1O95476 244 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 C6orf47O95873 294 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 IL1BP01584 269 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 RETP07949 1114 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 MRPL3P09001 348 aaKnown RBP1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 PSMC3P17980 439 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 MX1P20591 662 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 AK4P27144 223 aaPredicted RBP1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 IFNA8P32881 189 aa1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 ATP5C1P36542 298 aaKnown RBP1.61□□□□□ -2.15
RNU6-48P-201ENST00000384161 NAMPTP43490 491 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms